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BaseInfo

ncRNA ID novel_gma_miR7160
Species Glycine max
Class miRNA
Genome position Chr10:25223313-25223528 [+]
Reference genome Glycine_max_v2.0
Source SRR1451607;SRR1451609;SRR1451611
Length 23
Mature sequence(if miRNA) 1 - UAAAAAAAACCAAUGUUAACUGU - 23
Stem-loop(if miRNA) -UA         A        ------------------U  CAAUAGCAACACAUUCGUUAACAUCGGUUUUUUGAAAAAAUCGAUGUUAACUGUCAAUAAUAACACAUUCGUUA
   AAAAAAACC AUGUUAAC                   GU                                                                          A
   ||||||||| ||||||||                   ||                                                                          C
   UUUUUUUGG UACAAUUG                   CA                                                                          A
AUA         C        CUUACACAAUGAUAACUGU  AUUGUAGCCAAAAAAGUUUUUUGACUACAAUUGAUUGCAAUUGUAGCCAAAAAACAUUUUUUUUUUUUUGGGCU
Stem-loop sequence UAAAAAAAACCAAUGUUAACUGUCAAUAGCAACACAUUCGUUAACAUCGGUUUUUUGAAAAAAUCGAUGUUAACUGUCAAUAAUAACACAUUCGUUAACAUCGGGUUUUUUUUUUUUUACAAAAAACCGAUGUUAACGUUAGUUAACAUCAGUUUUUUGAAAAAACCGAUGUUAACUGUCAAUAGUAACACAUUCGUUAACAUCGGUUUUUUUAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT097688.1
ncRNA:23   UGUCAAUUGUAACCAAAAAAAAU   1
  |||*|||||||*||||||||||*
targets:975   ACAUUUAACAUAGGUUUUUUUUU   997

2.5 Soybean clone JCVI-FLGm-22M4 unknown mRNA NA coding protein psRNATarget
NM_001317503.1
ncRNA:23   UGUCAAUUGUAACCAAAAAAAAU   1
  |||*|||||||*||||||||||*
targets:975   ACAUUUAACAUAGGUUUUUUUUU   997

2.5 Glycine max uncharacterized LOC100788810 (LOC100788810), mRNA uncharacterized LOC100788810(LOC100788810) coding protein psRNATarget
XM_006600403.2
ncRNA:23   UGUCAAUUGUAACCAAAAAAAAU   1
  ***||*||=|||||||||||||*
targets:1927   UGUGUAAAUAUUGGUUUUUUUUU   1949

3.0 PREDICTED: Glycine max uncharacterized LOC100811568 (LOC100811568), mRNA uncharacterized LOC100811568(LOC100811568) coding protein psRNATarget