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BaseInfo

ncRNA ID novel_gma_miR7134
Species Glycine max
Class miRNA
Genome position Chr12:24257654-24257784 [+]
Reference genome Glycine_max_v2.0
Source SRR1451607;SRR1451611
Length 22
Mature sequence(if miRNA) 1 - UUUUUGUUGCAAAUGUUUUGUG - 22
Stem-loop(if miRNA) --         CAA      --      CAAUAAUG    A  UA        AAAUUU     AAAA  U
  UUUUUGUUG   AUGUUU  UGUGCU        GUAA GA  AUCUAGGA      GAUGC    UC U
  |||||||||   ||||||  ||||||        |||| ||  ||||||||      |||||    ||
  GAAAACAAU   UAUAAG  AUACGA        CGUU CU  UAGGUUCU      CUACG    AG A
AA         --A      AU      -AAUCAAA    A  UA        ----CU     --GA  U
Stem-loop sequence UUUUUGUUGCAAAUGUUUUGUGCUCAAUAAUGGUAAAGAUAAUCUAGGAAAAUUUGAUGCAAAAUCUUAUGAAGGCAUCUCUCUUGGAUAUUCAUUGCAAACUAAAGCAUAUAGAAUAUAUAACAAAAGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003556757.3
ncRNA:22   GUGUUUUGUAAACGUUGUUUUU   1
  =**|||||||*|||||||||||
targets:1185   UUAAAAACAUAUGCAACAAAAA   1206

1.5 PREDICTED: Glycine max uncharacterized LOC100805252 (LOC100805252), mRNA uncharacterized LOC100805252(LOC100805252) coding protein psRNATarget
XM_006580980.2
ncRNA:22   GUGUUUUGUAAACGUUGUUUUU   1
  **==|||*||||||||||||||
targets:3033   GUUGAAAAAUUUGCAACAAAAA   3054

2.0 PREDICTED: Glycine max symplekin-like (LOC100810420), transcript variant X3, mRNA symplekin-like(LOC100810420) coding protein psRNATarget
XM_014776177.1
ncRNA:22   GUGUUUUGUAAACGUUGUUUUU   1
  **==|||*||||||||||||||
targets:3032   GUUGAAAAAUUUGCAACAAAAA   3053

2.0 PREDICTED: Glycine max symplekin-like (LOC100810420), transcript variant X2, mRNA symplekin-like(LOC100810420) coding protein psRNATarget
XM_014776178.1
ncRNA:22   GUGUUUUGUAAACGUUGUUUUU   1
  **==|||*||||||||||||||
targets:2919   GUUGAAAAAUUUGCAACAAAAA   2940

2.0 PREDICTED: Glycine max symplekin-like (LOC100810420), transcript variant X4, mRNA symplekin-like(LOC100810420) coding protein psRNATarget
XM_014776176.1
ncRNA:22   GUGUUUUGUAAACGUUGUUUUU   1
  **==|||*||||||||||||||
targets:3032   GUUGAAAAAUUUGCAACAAAAA   3053

2.0 PREDICTED: Glycine max symplekin-like (LOC100810420), transcript variant X1, mRNA symplekin-like(LOC100810420) coding protein psRNATarget
XM_014779399.1
ncRNA:22   GUGUUUUGUAAACGUUGUUUUU   1
  ||-=|||||||||||||||=||
targets:3118   CA-GAAACAUUUGCAACAAGAA   3138

2.5 PREDICTED: Glycine max uncharacterized LOC100796806 (LOC100796806), transcript variant X2, mRNA uncharacterized LOC100796806(LOC100796806) coding protein psRNATarget
XM_006586019.2
ncRNA:22   GUGUUUUGUAAACGUUGUUUUU   1
  ||-=|||||||||||||||=||
targets:4333   CA-GAAACAUUUGCAACAAGAA   4353

2.5 PREDICTED: Glycine max uncharacterized LOC100796806 (LOC100796806), transcript variant X1, mRNA uncharacterized LOC100796806(LOC100796806) coding protein psRNATarget
NM_001251390.1
ncRNA:22   GUGUUUUGUAAACGUUGUUUUU   1
  *=||||||=|||||||*|||||
targets:765   GGCAAAACGUUUGCAAAAAAAA   786

2.5 Glycine max uncharacterized LOC100500196 (LOC100500196), mRNA uncharacterized LOC100500196(LOC100500196) coding protein psRNATarget