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BaseInfo

ncRNA ID novel_gma_miR7128
Species Glycine max
Class miRNA
Genome position Chr1:8705729-8705770 [-]
Reference genome Glycine_max_v2.0
Source SRR1451607
Length 21
Mature sequence(if miRNA) 22 - UCUGAAUGGACUGUGGCUUGA - 42
Stem-loop(if miRNA) --     A  GA      C  G
  UCUGA UG  CUGUGG UU A
  ||||| ||  |||||| ||
  AGACU AU  GAUACC AA G
UA     -  -A      U  G
Stem-loop sequence UCUGAAUGGACUGUGGCUUGAGGAAUCCAUAGAUAUCAGAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014761576.1
ncRNA:21   AGUUCGGUGUCAGGUAAGUCU   1
  ||=||||||||||||||||||
targets:348   UCGAGCCACAGUCCAUUCAGA   368

1.0 PREDICTED: Glycine max uncharacterized LOC106794332 (LOC106794332), mRNA uncharacterized LOC106794332(LOC106794332) coding protein psRNATarget
XM_014770450.1
ncRNA:21   AGUUCGGUGUCAGGUAAGUCU   1
  ||=||||||||||||||||||
targets:578   UCGAGCCACAGUCCAUUCAGA   598

1.0 PREDICTED: Glycine max uncharacterized LOC106796841 (LOC106796841), mRNA uncharacterized LOC106796841(LOC106796841) coding protein psRNATarget
XM_014767501.1
ncRNA:21   AGUUCGGUGUCAGGUAAGUCU   1
  ||=||||||||||||||||||
targets:908   UCGAGCCACAGUCCAUUCAGA   928

1.0 PREDICTED: Glycine max uncharacterized LOC106796055 (LOC106796055), partial mRNA uncharacterized LOC106796055(LOC106796055) coding protein psRNATarget
XM_014770488.1
ncRNA:21   AGUUCGGUGUCAGGUAAGUCU   1
  ||=||||||||||||||||||
targets:2162   UCGAGCCACAGUCCAUUCAGA   2182

1.0 PREDICTED: Glycine max uncharacterized LOC106796856 (LOC106796856), mRNA uncharacterized LOC106796856(LOC106796856) coding protein psRNATarget
NM_001248444.2
ncRNA:21   AGUUCGGUGUCAGGUAAGUCU   1
  ||=|||||=||||||||||||
targets:220   UCGAGCCAUAGUCCAUUCAGA   240

2.5 Glycine max uncharacterized LOC100500252 (LOC100500252), mRNA uncharacterized LOC100500252(LOC100500252) coding protein psRNATarget
BT091163.1
ncRNA:21   AGUUCGGUGUCAGGUAAGUCU   1
  ||=|||||=||||||||||||
targets:221   UCGAGCCAUAGUCCAUUCAGA   241

2.5 Soybean clone JCVI-FLGm-7E18 unknown mRNA NA coding protein psRNATarget
XM_006585825.1
ncRNA:21   AGUUCGGUGUCAGGUAAGUCU   1
  ||=|||||||||||||*||||
targets:50   UCGAGCCACAGUCCAUACAGA   70

2.5 PREDICTED: Glycine max uncharacterized LOC100810282 (LOC100810282), partial mRNA uncharacterized LOC100810282(LOC100810282) coding protein psRNATarget
XM_014773104.1
ncRNA:21   AGUUCGGUGUCAGGUAAGUCU   1
  |==|||||||||||||*||||
targets:50   UUGAGCCACAGUCCAUCCAGA   70

2.5 PREDICTED: Glycine max uncharacterized LOC102667191 (LOC102667191), partial mRNA uncharacterized LOC102667191(LOC102667191) coding protein psRNATarget
XM_014762848.1
ncRNA:21   AGUUCGGUGUCAGGUAAGUCU   1
  |==|||||||||||||*||||
targets:50   UUGAGCCACAGUCCAUACAGA   70

2.5 PREDICTED: Glycine max uncharacterized LOC106794938 (LOC106794938), partial mRNA uncharacterized LOC106794938(LOC106794938) coding protein psRNATarget
XM_003552624.3
ncRNA:21   AGUUC-GGUGUCAGGUAAGUCU   1
  |*|||-=|||||||||||||||
targets:590   UGAAGAUCACAGUCCAUUCAGA   611

3.0 PREDICTED: Glycine max beta-hexosaminidase 1-like (LOC100776871), mRNA beta-hexosaminidase 1-like(LOC100776871) coding protein psRNATarget