Search result

BaseInfo

ncRNA ID	novel_gma_miR7125
Species	Glycine max
Class	miRNA
Genome position	Chr12:18087059-18087130 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451607;SRR1451609;SRR1451611
Length	21
Mature sequence(if miRNA)	52 - UCACCCGUCCCUGGAUUGUUC - 72
Stem-loop(if miRNA)	--    -     --    AAG     UCUUC     AU   GCAA CCAGG  CGGG   GAUUU     AAUGU  A   |||| |||||  ||||   |||||     |||||  G   UGUU GGUCC  GCCC   CUGAG     UUACG  C CU    A     CU    --A     UUUGU     CC
Stem-loop sequence	GCAACCAGGCGGGAAGGAUUUUCUUCAAUGUAUAGCCCGCAUUUGUUUGAGUCACCCGUCCCUGGAUUGUUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014767652.1	ncRNA:21   CUUGUUAGGUCCCUGCCCACU   1   ||||=|||||||||||||||| targets:195   GAACGAUCCAGGGACGGGUGA   215 Target Full Sequence	1.0	PREDICTED: Glycine max uncharacterized LOC106796100 (LOC106796100), mRNA	uncharacterized LOC106796100(LOC106796100)	coding protein	psRNATarget
XM_014770488.1	ncRNA:21   CUUGUUAGGUCCCUGCCCACU   1   ||||=|||||||||||||||| targets:1518   GAACGAUCCAGGGACGGGUGA   1538 Target Full Sequence	1.0	PREDICTED: Glycine max uncharacterized LOC106796856 (LOC106796856), mRNA	uncharacterized LOC106796856(LOC106796856)	coding protein	psRNATarget
XM_014773484.1	ncRNA:21   CUUGUUAGGUCCCUGCCCACU   1   ||||=|||||||||||||||| targets:1764   GAACGAUCCAGGGACGGGUGA   1784 Target Full Sequence	1.0	PREDICTED: Glycine max uncharacterized LOC102662694 (LOC102662694), transcript variant X2, mRNA	uncharacterized LOC102662694(LOC102662694)	coding protein	psRNATarget
XM_014773485.1	ncRNA:21   CUUGUUAGGUCCCUGCCCACU   1   ||||=|||||||||||||||| targets:1853   GAACGAUCCAGGGACGGGUGA   1873 Target Full Sequence	1.0	PREDICTED: Glycine max uncharacterized LOC102662694 (LOC102662694), transcript variant X3, mRNA	uncharacterized LOC102662694(LOC102662694)	coding protein	psRNATarget
XM_014773483.1	ncRNA:21   CUUGUUAGGUCCCUGCCCACU   1   ||||=|||||||||||||||| targets:2260   GAACGAUCCAGGGACGGGUGA   2280 Target Full Sequence	1.0	PREDICTED: Glycine max uncharacterized LOC102662694 (LOC102662694), transcript variant X1, mRNA	uncharacterized LOC102662694(LOC102662694)	coding protein	psRNATarget
XM_014770570.1	ncRNA:21   CUUGUUAGGUCCCUGCCCACU   1   ||||||||||||||=|||||| targets:808   GAACAAUCCAGGGAUGGGUGA   828 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC106796922 (LOC106796922), mRNA	uncharacterized LOC106796922(LOC106796922)	coding protein	psRNATarget
XM_006593125.2	ncRNA:21   CUUGUUAGGUCCCUGCCCACU   1   ||||=|||=|||||||||||| targets:1505   GAACGAUCUAGGGACGGGUGA   1525 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102661906 (LOC102661906), mRNA	uncharacterized LOC102661906(LOC102661906)	coding protein	psRNATarget
XM_014770986.1	ncRNA:21   CUUGUUAGGUCCCUGCCCACU   1   ||||=|||||*|||||||||| targets:1510   GAACGAUCCAAGGACGGGUGA   1530 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC106797154 (LOC106797154), transcript variant X2, mRNA	uncharacterized LOC106797154(LOC106797154)	coding protein	psRNATarget
XM_014770985.1	ncRNA:21   CUUGUUAGGUCCCUGCCCACU   1   ||||=|||||*|||||||||| targets:1605   GAACGAUCCAAGGACGGGUGA   1625 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC106797154 (LOC106797154), transcript variant X1, mRNA	uncharacterized LOC106797154(LOC106797154)	coding protein	psRNATarget