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BaseInfo

ncRNA ID novel_gma_miR7114
Species Glycine max
Class miRNA
Genome position Chr1:44630255-44630352 [-]
Reference genome Glycine_max_v2.0
Source SRR1451607
Length 24
Mature sequence(if miRNA) 1 - AUUUUCCAUGGAUUCUUUCUGACG - 24
Stem-loop(if miRNA) --UG           U               GCAAA     A  A    
    AGAAAGAAUCC UGGGAAAUUUCUGAC     AUAUU GU UGGAA
    ||||||||||| |||||||||||||||     ||||| || ||||U
    UCUUUCUUAGG ACCUUUUAAAGAUUG     UAUAG CA GCUUU
GCAG           U               ACUGG     G  -    
Stem-loop sequence UGAGAAAGAAUCCUUGGGAAAUUUCUGACGCAAAAUAUUAGUAUGGAAUUUUCGACGGAUAUGGUCAGUUAGAAAUUUUCCAUGGAUUCUUUCUGACG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014775836.1
ncRNA:24   GCAG---UCUUUCUUAGGUACCUUUUA   1
  =*||---||||*||=||||||||||||
targets:2606   UAUCCAAAGAAUGAGUCCAUGGAAAAU   2632

2.5 PREDICTED: Glycine max uncharacterized LOC100816646 (LOC100816646), transcript variant X3, mRNA uncharacterized LOC100816646(LOC100816646) coding protein psRNATarget
XM_003524399.3
ncRNA:24   GCAG---UCUUUCUUAGGUACCUUUUA   1
  =*||---||||*||=||||||||||||
targets:2602   UAUCCAAAGAAUGAGUCCAUGGAAAAU   2628

2.5 PREDICTED: Glycine max uncharacterized LOC100816646 (LOC100816646), transcript variant X1, mRNA uncharacterized LOC100816646(LOC100816646) coding protein psRNATarget