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BaseInfo

ncRNA ID novel_gma_miR7108
Species Glycine max
Class miRNA
Genome position Chr9:21086109-21086167 [+]
Reference genome Glycine_max_v2.0
Source SRR1451607
Length 23
Mature sequence(if miRNA) 37 - UUUAACAUCGGUUAUUUGAAAAA - 59
Stem-loop(if miRNA) ---                    AUUGAAU
   UUCAAAUAACCGAUGUUAAA       U
   ||||||||||||||||||||
   AAGUUUAUUGGCUACAAUUU       U
AAA                    AGUGUUA
Stem-loop sequence UUCAAAUAACCGAUGUUAAAAUUGAAUUUAUUGUGAUUUAACAUCGGUUAUUUGAAAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI410543.1
ncRNA:23   AAAAAGUUUAUUGGCUACAAUUU   1
  |||||=||||||||*||||||||
targets:172   UUUUUUAAAUAACCAAUGUUAAA   194

2.5 Sequence 8668 from Patent EP2074227 NA coding protein psRNATarget
JB171004.1
ncRNA:23   AAAAAGUUUAUUGGCUACAAUUU   1
  |||||=||||||||*||||||||
targets:172   UUUUUUAAAUAACCAAUGUUAAA   194

2.5 Sequence 8668 from Patent EP2559767 NA coding protein psRNATarget
LQ242673.1
ncRNA:23   AAAAAGUUUAUUGGCUACAAUUU   1
  |||||=||||||||*||||||||
targets:172   UUUUUUAAAUAACCAAUGUUAAA   194

2.5 Sequence 8668 from Patent EP2985353 NA coding protein psRNATarget
XM_014776578.1
ncRNA:23   AAAAAGUUUAUUGGCUACAAUUU   1
  *|||||||||||||*|||||||*
targets:1639   GUUUUCAAAUAACCAAUGUUAAC   1661

2.5 PREDICTED: Glycine max ankyrin repeat and SOCS box protein 7-like (LOC100786031), transcript variant X1, mRNA ankyrin repeat and SOCS box protein 7-like(LOC100786031) coding protein psRNATarget