ncRNA ID | novel_gma_miR7095 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:52483205-52483323 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451607 |
Length | 22 |
Mature sequence(if miRNA) | 98 - UUUCGUGUCAUGACUAUUGUUA - 119 |
Stem-loop(if miRNA) |
--UU   U       ---C         ---G          AUC              AUGA     UCG GUCAUGA    UAUUGUUAU    AUUUUUUAUG   ACUAUUAUAUUAUU    U     ||| |||||||    |||||||||    ||||||||||   ||||||||||||||    G     AGC UAGUAUU    AUAACAAUA    UAAAAAAUGC   UGAUAAUAUAAUAA    A UAAU   -       AAUA         GUAA          -AA              GUAU |
Stem-loop sequence | UUUCGUGUCAUGACUAUUGUUAUGAUUUUUUAUGAUCACUAUUAUAUUAUUAUGAUGAUAUGAAUAAUAUAAUAGUAACGUAAAAAAUAAUGAUAACAAUAAUAAUUAUGAUCGAUAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003531352.3 |
|
2.5 | PREDICTED: Glycine max WAT1-related protein At5g64700-like (LOC100796986), transcript variant X2, mRNA | WAT1-related protein At5g64700-like(LOC100796986) | coding protein | psRNATarget | |||||||||
XM_014778963.1 |
|
2.5 | PREDICTED: Glycine max WAT1-related protein At5g64700-like (LOC100796986), transcript variant X1, mRNA | WAT1-related protein At5g64700-like(LOC100796986) | coding protein | psRNATarget |