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BaseInfo

ncRNA ID novel_gma_miR7095
Species Glycine max
Class miRNA
Genome position Chr1:52483205-52483323 [-]
Reference genome Glycine_max_v2.0
Source SRR1451607
Length 22
Mature sequence(if miRNA) 98 - UUUCGUGUCAUGACUAUUGUUA - 119
Stem-loop(if miRNA) --UU   U       ---C         ---G          AUC              AUGA
    UCG GUCAUGA    UAUUGUUAU    AUUUUUUAUG   ACUAUUAUAUUAUU    U
    ||| |||||||    |||||||||    ||||||||||   ||||||||||||||    G
    AGC UAGUAUU    AUAACAAUA    UAAAAAAUGC   UGAUAAUAUAAUAA    A
UAAU   -       AAUA         GUAA          -AA              GUAU
Stem-loop sequence UUUCGUGUCAUGACUAUUGUUAUGAUUUUUUAUGAUCACUAUUAUAUUAUUAUGAUGAUAUGAAUAAUAUAAUAGUAACGUAAAAAAUAAUGAUAACAAUAAUAAUUAUGAUCGAUAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003531352.3
ncRNA:22   AUUGUUAUCAGUACUGUGCUUU   1
  |*|||||*||||||||||||*|
targets:1406   UCACAAUUGUCAUGACACGACA   1427

2.5 PREDICTED: Glycine max WAT1-related protein At5g64700-like (LOC100796986), transcript variant X2, mRNA WAT1-related protein At5g64700-like(LOC100796986) coding protein psRNATarget
XM_014778963.1
ncRNA:22   AUUGUUAUCAGUACUGUGCUUU   1
  |*|||||*||||||||||||*|
targets:1409   UCACAAUUGUCAUGACACGACA   1430

2.5 PREDICTED: Glycine max WAT1-related protein At5g64700-like (LOC100796986), transcript variant X1, mRNA WAT1-related protein At5g64700-like(LOC100796986) coding protein psRNATarget