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BaseInfo

ncRNA ID novel_gma_miR7094
Species Glycine max
Class miRNA
Genome position Chr7:17464431-17464564 [+]
Reference genome Glycine_max_v2.0
Source SRR1451607;SRR1451621
Length 22
Mature sequence(if miRNA) 1 - AUUUGUGACAAUUAAUUUUGAU - 22
Stem-loop(if miRNA) --A     G               A       UAAUAUG                  -U      CCU
   UUUGU ACAAUUAAUUUUGAU UAAUAAU       UUUACAUAUAUGAAUUUU  AUGAAA   A
   ||||| ||||||||||||||| |||||||       ||||||||||||||||||  ||||||
   GAAUA UGUUAAUUAAAACUA AUUAUUA       AAAUGUAUAUAUUUAAAA  UAUUUU   U
CUG     A               G       -UAUAAA                  UU      UAG
Stem-loop sequence AUUUGUGACAAUUAAUUUUGAUAUAAUAAUUAAUAUGUUUACAUAUAUGAAUUUUUAUGAAACCUAUGAUUUUUAUUUAAAAUUUAUAUAUGUAAAAAAUAUAUUAUUAGAUCAAAAUUAAUUGUAAUAAGGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003532129.3
ncRNA:22   UA-GUUUUAAUUAACAGUGUUUA   1
  ||-|*||||||||||||||||||
targets:548   AUGCCAAAUUAAUUGUCACAAAU   570

1.0 PREDICTED: Glycine max 4-coumarate--CoA ligase-like 1 (LOC100814237), mRNA 4-coumarate--CoA ligase-like 1(LOC100814237) coding protein psRNATarget
XM_003552951.3
ncRNA:22   UA-GUUUUAAUUAACAGUGUUUA   1
  ||-|*|||||=||||||||||||
targets:517   AUGCCAAAUUGAUUGUCACAAAU   539

2.5 PREDICTED: Glycine max 4-coumarate--CoA ligase-like 1 (LOC100811418), mRNA 4-coumarate--CoA ligase-like 1(LOC100811418) coding protein psRNATarget
XM_003547522.3
ncRNA:22   UAGUUUUAAUUAACAGUGUUUA   1
  ***||||||||||||||=|||*
targets:2553   UGAAAAAUUAAUUGUCAUAAAA   2574

2.5 PREDICTED: Glycine max uncharacterized LOC100808161 (LOC100808161), mRNA uncharacterized LOC100808161(LOC100808161) coding protein psRNATarget
AK243846.1
ncRNA:22   UAGUUUUAAUUAACAGUGUUUA   1
  =|*=|||||||*||||||||||
targets:190   GUGGAAAUUAAGUGUCACAAAU   211

2.5 Glycine max cDNA, clone: GMFL01-01-G15 NA coding protein psRNATarget
XM_003545904.3
ncRNA:22   UAGUUUUAAUUAACAGUGUUUA   1
  =|*=|||||||*||||||||||
targets:434   GUGGAAAUUAAGUGUCACAAAU   455

2.5 PREDICTED: Glycine max uncharacterized LOC100820073 (LOC100820073), mRNA uncharacterized LOC100820073(LOC100820073) coding protein psRNATarget
BT094736.1
ncRNA:22   UAGUUUUAAUUAACAGUGUUUA   1
  ||==||||*||||||||||||*
targets:149   AUUGAAAUCAAUUGUCACAAAA   170

3.0 Soybean clone JCVI-FLGm-6G15 unknown mRNA NA coding protein psRNATarget