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BaseInfo

ncRNA ID novel_gma_miR7073
Species Glycine max
Class miRNA
Genome position Chr4:32160247-32160370 [-]
Reference genome Glycine_max_v2.0
Source SRR1451607
Length 24
Mature sequence(if miRNA) 1 - AGAGACAAUGUUGACUUAUCGAGU - 24
Stem-loop(if miRNA) --  CC                 AAA   C             UCAA    -AAA     UAU
  UC  UGAGUCGAUAUUGUCUC   GAG UAAUGUCGGCUUA    GUAG    UCUAA   U
  ||  |||||||||||||||||   ||| |||||||||||||    ||||    |||||
  AG  AUUCAGUUGUAACAGAG   CUC GUUAUAGCUGAAU    CGUU    AGAUU   U
UG  CU                 AAA   U             -CCC    GACA     CUA
Stem-loop sequence UCCCUGAGUCGAUAUUGUCUCAAAGAGCUAAUGUCGGCUUAUCAAGUAGAAAUCUAAUAUUUAUCUUAGAACAGUUGCCCCUAAGUCGAUAUUGUCUCAAAGAGACAAUGUUGACUUAUCGAGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014774203.1
ncRNA:24   UGAGCUA-UUCAGUUGUAACAGAGA   1
  |=|*|||-||*||||||||||||||
targets:1200   AUUGGAUCAAAUCAACAUUGUCUCU   1224

3.0 PREDICTED: Glycine max probable polygalacturonase At3g15720 (LOC100818729), mRNA probable polygalacturonase At3g15720(LOC100818729) coding protein psRNATarget
XM_014774204.1
ncRNA:24   UGAGCUA-UUCAGUUGUAACAGAGA   1
  |=|*|||-||*||||||||||||||
targets:1219   AUUGGAUCAAAUCAACAUUGUCUCU   1243

3.0 PREDICTED: Glycine max probable polygalacturonase At3g15720 (LOC100820332), mRNA probable polygalacturonase At3g15720(LOC100820332) coding protein psRNATarget