ncRNA ID | novel_gma_miR7073 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr4:32160247-32160370 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451607 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGAGACAAUGUUGACUUAUCGAGU - 24 |
Stem-loop(if miRNA) |
--  CC                 AAA   C             UCAA    -AAA     UAU   UC  UGAGUCGAUAUUGUCUC   GAG UAAUGUCGGCUUA    GUAG    UCUAA   U   ||  |||||||||||||||||   ||| |||||||||||||    ||||    |||||   AG  AUUCAGUUGUAACAGAG   CUC GUUAUAGCUGAAU    CGUU    AGAUU   U UG  CU                 AAA   U             -CCC    GACA     CUA |
Stem-loop sequence | UCCCUGAGUCGAUAUUGUCUCAAAGAGCUAAUGUCGGCUUAUCAAGUAGAAAUCUAAUAUUUAUCUUAGAACAGUUGCCCCUAAGUCGAUAUUGUCUCAAAGAGACAAUGUUGACUUAUCGAGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014774203.1 |
|
3.0 | PREDICTED: Glycine max probable polygalacturonase At3g15720 (LOC100818729), mRNA | probable polygalacturonase At3g15720(LOC100818729) | coding protein | psRNATarget | |||||||||
XM_014774204.1 |
|
3.0 | PREDICTED: Glycine max probable polygalacturonase At3g15720 (LOC100820332), mRNA | probable polygalacturonase At3g15720(LOC100820332) | coding protein | psRNATarget |