Search result

BaseInfo

ncRNA ID novel_gma_miR7053
Species Glycine max
Class miRNA
Genome position Chr20:13846890-13846986 [-]
Reference genome Glycine_max_v2.0
Source SRR1451607
Length 24
Mature sequence(if miRNA) 1 - AAUACAUUUCUGGAUUGCCUUGUC - 24
Stem-loop(if miRNA) --            A         C                  AGAUU
  CAAGGCAAUCCG AAAUGUAUU UGGAUUGCAUGAUCCGUA     U
  |||||||||||| ||||||||| ||||||||||||||||||     G
  GUUCCGUUAGGU UUUACAUAA ACCUAACGUACUAGGUAU     G
CU            C         U                  AACGU
Stem-loop sequence CAAGGCAAUCCGAAAAUGUAUUCUGGAUUGCAUGAUCCGUAAGAUUUGGUGCAAUAUGGAUCAUGCAAUCCAUAAUACAUUUCUGGAUUGCCUUGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT099092.1
ncRNA:24   CUGUUCCGUUAGGUCUUUACAUAA   1
  ||=|*||||=||||||||||*|||
targets:243   GAUACGGCAGUCCAGAAAUGCAUU   266

2.5 Soybean clone JCVI-FLGm-13O18 unknown mRNA NA coding protein psRNATarget
XM_003516228.3
ncRNA:24   CUGUUCCGUUAGGUCUUUACAUAA   1
  ||*||||*||||||||||||*|||
targets:141   GAAAAGGGAAUCCAGAAAUGCAUU   164

2.5 PREDICTED: Glycine max uncharacterized protein At1g04910-like (LOC100775903), transcript variant X1, mRNA uncharacterized protein At1g04910-like(LOC100775903) coding protein psRNATarget