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BaseInfo

ncRNA ID	novel_gma_miR7048
Species	Glycine max
Class	miRNA
Genome position	Chr11:5084381-5084569 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451606
Length	24
Mature sequence(if miRNA)	1 - AUUAAAAUGUAAAUUGUAGGGACU - 24
Stem-loop(if miRNA)	--                         C     AUC   CUAAU          GUU      ---A     AUAGUCCUGUAUUUUUCAAAGUAUA   UCCCUAUAAUUUAUAUUUUAAUUCU UUUUA   UCU     UUUAAAAAUA   UUUUUA    UCUUU                         A   ||||||||||||||||||||||||| |||||   |||     ||||||||||   ||||||    |||||   AGGGAUGUUAAAUGUAAAAUUAAGA AAAAU   AGA     AAAUUUUUAU   AAAAAU    UAUAU                         U UC                         -     -CA   AUAUC          AAU      CAAA     CAAAUAUAAAAUUAAGAGAAAAUCA
Stem-loop sequence	UCCCUAUAAUUUAUAUUUUAAUUCUCUUUUAAUCUCUCUAAUUUUAAAAAUAGUUUUUUUAAUCUUUAUAGUCCUGUAUUUUUCAAAGUAUAAUACUAAAAGAGAAUUAAAAUAUAAACUAUAUAAACUAAAAAUAAUAUUUUUAAACUAUAAGAACUAAAAAGAAUUAAAAUGUAAAUUGUAGGGACU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006577048.2	ncRNA:24   UCAGGGAUGUUAAAUGUAAAAUUA   1   ||||||||=|=||||||||||||| targets:1927   AGUCCCUAUAGUUUACAUUUUAAU   1950 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100819268 (LOC100819268), transcript variant X1, mRNA	uncharacterized LOC100819268(LOC100819268)	coding protein	psRNATarget
XM_014773932.1	ncRNA:24   UCAGGGAUGUUAAAUGUAAAAUUA   1   ||||||||=|=||||||||||||| targets:2037   AGUCCCUAUAGUUUACAUUUUAAU   2060 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100819268 (LOC100819268), transcript variant X2, mRNA	uncharacterized LOC100819268(LOC100819268)	coding protein	psRNATarget
XM_003543229.3	ncRNA:24   UCAGGGAUGUUAAAUGUAAAAUUA   1   *|||=*||=||||||||||||||| targets:949   UGUCUAUAUAAUUUACAUUUUAAU   972 Target Full Sequence	2.0	PREDICTED: Glycine max protein sym-1-like (LOC100796063), mRNA	protein sym-1-like(LOC100796063)	coding protein	psRNATarget
XM_014776197.1	ncRNA:24   UCAGGGAUGUUAAAUGUAAAAUUA   1   |****=||||||||||=||||||| targets:1532   AUGGAUUACAAUUUACGUUUUAAU   1555 Target Full Sequence	2.5	PREDICTED: Glycine max cysteine--tRNA ligase, chloroplastic/mitochondrial-like (LOC100786700), transcript variant X3, mRNA	cysteine--tRNA ligase, chloroplastic/mitochondrial-like(LOC100786700)	coding protein	psRNATarget
XM_006581285.2	ncRNA:24   UCAGGGAUGUUAAAUGUAAAAUUA   1   |****=||||||||||=||||||| targets:1682   AUGGAUUACAAUUUACGUUUUAAU   1705 Target Full Sequence	2.5	PREDICTED: Glycine max cysteine--tRNA ligase, chloroplastic/mitochondrial-like (LOC100786700), transcript variant X2, mRNA	cysteine--tRNA ligase, chloroplastic/mitochondrial-like(LOC100786700)	coding protein	psRNATarget
XM_003526272.3	ncRNA:24   UCAGGGAUGUUAAAUGUAAAAUUA   1   |****=||||||||||=||||||| targets:1936   AUGGAUUACAAUUUACGUUUUAAU   1959 Target Full Sequence	2.5	PREDICTED: Glycine max cysteine--tRNA ligase, chloroplastic/mitochondrial-like (LOC100786700), transcript variant X1, mRNA	cysteine--tRNA ligase, chloroplastic/mitochondrial-like(LOC100786700)	coding protein	psRNATarget