ncRNA ID | novel_gma_miR7044 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr6:11680252-11680420 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451606;SRR1451609;SRR1451610 |
Length | 21 |
Mature sequence(if miRNA) | 149 - UUAUUUUUAAGUAUAGGGACU - 169 |
Stem-loop(if miRNA) |
--      C          C   A            U                    ----------A         AAAUG  AAGG   A   UCCCUA ACUUAAAAAU AUC UUUUUAGUUCCU UACAAGCACUUUCAGGUCCU           GCCGUUACA     AC    ACU A   |||||| |||||||||| ||| |||||||||||| ||||||||||||||||||||           |||||||||     ||    |||   AGGGAU UGAAUUUUUA UAG GGAAAUCAGGGA AUGUUCGUGAAAGUUUAGGG           UGGCAAUGU     UG    UGG A UC      A          U   G            C                    AAAACUAGGGG         ----A  -AAA   A |
Stem-loop sequence | UCCCUACACUUAAAAAUCAUCAUUUUUAGUUCCUUUACAAGCACUUUCAGGUCCUAGCCGUUACAAAAUGACAAGGACUAAAAGGUAAAGUAUGUAACGGUGGGGAUCAAAAGGGAUUUGAAAGUGCUUGUACAGGGACUAAAGGGGAUUAUUUUUAAGUAUAGGGACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006574105.1 |
|
2.5 | PREDICTED: Glycine max UPF0481 protein At3g47200-like (LOC102659498), mRNA | UPF0481 protein At3g47200-like(LOC102659498) | coding protein | psRNATarget |