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BaseInfo

ncRNA ID novel_gma_miR7044
Species Glycine max
Class miRNA
Genome position Chr6:11680252-11680420 [+]
Reference genome Glycine_max_v2.0
Source SRR1451606;SRR1451609;SRR1451610
Length 21
Mature sequence(if miRNA) 149 - UUAUUUUUAAGUAUAGGGACU - 169
Stem-loop(if miRNA) --      C          C   A            U                    ----------A         AAAUG  AAGG   A
  UCCCUA ACUUAAAAAU AUC UUUUUAGUUCCU UACAAGCACUUUCAGGUCCU           GCCGUUACA     AC    ACU A
  |||||| |||||||||| ||| |||||||||||| ||||||||||||||||||||           |||||||||     ||    |||
  AGGGAU UGAAUUUUUA UAG GGAAAUCAGGGA AUGUUCGUGAAAGUUUAGGG           UGGCAAUGU     UG    UGG A
UC      A          U   G            C                    AAAACUAGGGG         ----A  -AAA   A
Stem-loop sequence UCCCUACACUUAAAAAUCAUCAUUUUUAGUUCCUUUACAAGCACUUUCAGGUCCUAGCCGUUACAAAAUGACAAGGACUAAAAGGUAAAGUAUGUAACGGUGGGGAUCAAAAGGGAUUUGAAAGUGCUUGUACAGGGACUAAAGGGGAUUAUUUUUAAGUAUAGGGACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006574105.1
ncRNA:21   UCAGGGAUAUGAAUUUUUAUU   1
  *|*|||||||||*||||||||
targets:471   CGACCCUAUACUAAAAAAUAA   491

2.5 PREDICTED: Glycine max UPF0481 protein At3g47200-like (LOC102659498), mRNA UPF0481 protein At3g47200-like(LOC102659498) coding protein psRNATarget