ncRNA ID | novel_gma_miR7028 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr3:42649577-42649684 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451606;SRR1451615 |
Length | 24 |
Mature sequence(if miRNA) | 85 - AUUAUAGAGACUAAAAAGAGCACU - 108 |
Stem-loop(if miRNA) |
--  A        A    -             -----     -   G  AC     A   UG UCUUUUUA UCUU AUAGUUUAUAUUU     UAAUU AUA GG  UAAAA A   || |||||||| |||| |||||||||||||     ||||| ||| ||  ||||| C   AC AGAAAAAU AGAG UAUUAAAUGUAAA     AUUAG UAU UC  AUUUU A UC  G        C    A             AAAAA     G   A  AA     C |
Stem-loop sequence | UGAUCUUUUUAAUCUUAUAGUUUAUAUUUUAAUUAUAGGGACUAAAAAACACUUUUAAACUAUAUGGAUUAAAAAAAAAUGUAAAUUAUAGAGACUAAAAAGAGCACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006577048.2 |
|
2.0 | PREDICTED: Glycine max uncharacterized LOC100819268 (LOC100819268), transcript variant X1, mRNA | uncharacterized LOC100819268(LOC100819268) | coding protein | psRNATarget | |||||||||
XM_014773932.1 |
|
2.0 | PREDICTED: Glycine max uncharacterized LOC100819268 (LOC100819268), transcript variant X2, mRNA | uncharacterized LOC100819268(LOC100819268) | coding protein | psRNATarget |