Search result

BaseInfo

ncRNA ID novel_gma_miR7025
Species Glycine max
Class miRNA
Genome position Chr2:42589926-42590023 [+]
Reference genome Glycine_max_v2.0
Source SRR1451606
Length 24
Mature sequence(if miRNA) 75 - UCAGAACAUGACACUUGGCAGUCA - 98
Stem-loop(if miRNA) --  GA   CA                 --------  A       CAACA   U
  AC  CCA  UGUCAUGUUUUGAUUGG        UC AUGAAAG     AUG A
  ||  |||  |||||||||||||||||        || |||||||     ||| U
  UG  GGU  ACAGUACAAGACUAACC        AG UACUUUC     UAC U
AC  AC   UC                 UAUAGUUA  G       -----   U
Stem-loop sequence ACGACCACAUGUCAUGUUUUGAUUGGUCAAUGAAAGCAACAAUGUAUUUCAUCUUUCAUGGAAUUGAUAUCCAAUCAGAACAUGACACUUGGCAGUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006595964.2
ncRNA:24   ACUG-ACGGUUCACAGUACAAGACU   1
  *||=-|||||||||||||||*|||=
targets:2099   AGAUGUGCCAAGUGUCAUGUGCUGG   2123

2.5 PREDICTED: Glycine max guanine nucleotide-binding protein alpha-2 subunit-like (LOC100781223), transcript variant X5, mRNA guanine nucleotide-binding protein alpha-2 subunit-like(LOC100781223) coding protein psRNATarget
XM_006595963.2
ncRNA:24   ACUG-ACGGUUCACAGUACAAGACU   1
  *||=-|||||||||||||||*|||=
targets:2208   AGAUGUGCCAAGUGUCAUGUGCUGG   2232

2.5 PREDICTED: Glycine max guanine nucleotide-binding protein alpha-2 subunit-like (LOC100781223), transcript variant X3, mRNA guanine nucleotide-binding protein alpha-2 subunit-like(LOC100781223) coding protein psRNATarget
XM_006595962.2
ncRNA:24   ACUG-ACGGUUCACAGUACAAGACU   1
  *||=-|||||||||||||||*|||=
targets:2219   AGAUGUGCCAAGUGUCAUGUGCUGG   2243

2.5 PREDICTED: Glycine max guanine nucleotide-binding protein alpha-2 subunit-like (LOC100781223), transcript variant X2, mRNA guanine nucleotide-binding protein alpha-2 subunit-like(LOC100781223) coding protein psRNATarget
XM_003544498.3
ncRNA:24   ACUG-ACGGUUCACAGUACAAGACU   1
  *||=-|||||||||||||||*|||=
targets:2246   AGAUGUGCCAAGUGUCAUGUGCUGG   2270

2.5 PREDICTED: Glycine max guanine nucleotide-binding protein alpha-2 subunit-like (LOC100781223), transcript variant X4, mRNA guanine nucleotide-binding protein alpha-2 subunit-like(LOC100781223) coding protein psRNATarget
XM_006595961.2
ncRNA:24   ACUG-ACGGUUCACAGUACAAGACU   1
  *||=-|||||||||||||||*|||=
targets:2266   AGAUGUGCCAAGUGUCAUGUGCUGG   2290

2.5 PREDICTED: Glycine max guanine nucleotide-binding protein alpha-2 subunit-like (LOC100781223), transcript variant X1, mRNA guanine nucleotide-binding protein alpha-2 subunit-like(LOC100781223) coding protein psRNATarget