ncRNA ID | novel_gma_miR7017 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:40032726-40032867 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451606 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AACCGAUGUAGAAUGUCAGAAUUC - 24 |
Stem-loop(if miRNA) |
--AUGA   U                 C   A   C          U    -G    C           UAG       UGA CAUUCUACAUCGGUUGU AGG CAA CGAUGUAGAA UUUG  CAUU UAAGACGGGUU   A       ||| ||||||||||||||||| ||| ||| |||||||||| ||||  |||| |||||||||||       ACU GUAAGAUGUAGCCAAUA UCC GUU GCUACAUCUU AGAC  GUAA AUUCUGCCCAA   G CUUAAG   -                 A   C   A          U    AA    A           CCA |
Stem-loop sequence | AUGAUGAUCAUUCUACAUCGGUUGUCAGGACAACCGAUGUAGAAUUUUGGCAUUCUAAGACGGGUUUAGAGACCAACCCGUCUUAAAAUGAACAGAUUUCUACAUCGAUUGCCCUAAUAACCGAUGUAGAAUGUCAGAAUUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014767461.1 |
|
1.0 | PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA | putative dual specificity protein phosphatase DSP8(LOC100787468) | coding protein | psRNATarget |