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BaseInfo

ncRNA ID novel_gma_miR7017
Species Glycine max
Class miRNA
Genome position Chr18:40032726-40032867 [-]
Reference genome Glycine_max_v2.0
Source SRR1451606
Length 24
Mature sequence(if miRNA) 1 - AACCGAUGUAGAAUGUCAGAAUUC - 24
Stem-loop(if miRNA) --AUGA   U                 C   A   C          U    -G    C           UAG
      UGA CAUUCUACAUCGGUUGU AGG CAA CGAUGUAGAA UUUG  CAUU UAAGACGGGUU   A
      ||| ||||||||||||||||| ||| ||| |||||||||| ||||  |||| |||||||||||
      ACU GUAAGAUGUAGCCAAUA UCC GUU GCUACAUCUU AGAC  GUAA AUUCUGCCCAA   G
CUUAAG   -                 A   C   A          U    AA    A           CCA
Stem-loop sequence AUGAUGAUCAUUCUACAUCGGUUGUCAGGACAACCGAUGUAGAAUUUUGGCAUUCUAAGACGGGUUUAGAGACCAACCCGUCUUAAAAUGAACAGAUUUCUACAUCGAUUGCCCUAAUAACCGAUGUAGAAUGUCAGAAUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014767461.1
ncRNA:24   CUUA-AGACUGUAAGAUGUAGCCAA   1
  ||||-||*|||||||||||||||||
targets:2142   GAAUGUCCGACAUUCUACAUCGGUU   2166

1.0 PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA putative dual specificity protein phosphatase DSP8(LOC100787468) coding protein psRNATarget