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BaseInfo

ncRNA ID novel_gma_miR7003
Species Glycine max
Class miRNA
Genome position Chr15:35434608-35434791 [-]
Reference genome Glycine_max_v2.0
Source SRR1292928
Length 22
Mature sequence(if miRNA) 1 - AUUCUAAGUCGGGUUUGGAGAC - 22
Stem-loop(if miRNA) --           U         CC   C           A     A        CC           G  AU      A    A    UGU
  CUCCAAACCCG CUUAGAAUG  CAG AUUCUACGACG UUUUU GGUCAUAA  GUCUUAGAAUG UG  CAUUCU AGAC GGUU   C
  ||||||||||| |||||||||  ||| ||||||||||| ||||| ||||||||  ||||||||||| ||  |||||| |||| ||||
  GAGGUUUGGGC GAAUCUUAC  GUU UAAGAUGCUGC AAAAA CCAGUAUU  CAGAAUCUUAC AC  GUAAGA UCUG CCAA   U
CA           U         UU   A           C     C        AA           A  AC      C    C    CCC
Stem-loop sequence CUCCAAACCCGUCUUAGAAUGCCCAGCAUUCUACGACGAUUUUUAGGUCAUAACCGUCUUAGAAUGGUGAUCAUUCUAAGACAGGUUUGUCUCCCAACCCGUCUCAGAAUGCACAACAUUCUAAGACAAUUAUGACCCAAAAACCGUCGUAGAAUAUUGUUCAUUCUAAGUCGGGUUUGGAGAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014767461.1
ncRNA:22   CAGAGGUUUGGGCUGAAUCUUA   1
  |||||=|||||||*||||||||
targets:2082   GUCUCUAAACCCGUCUUAGAAU   2103

2.5 PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA putative dual specificity protein phosphatase DSP8(LOC100787468) coding protein psRNATarget