ncRNA ID | novel_gma_miR7003 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr15:35434608-35434791 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1292928 |
Length | 22 |
Mature sequence(if miRNA) | 1 - AUUCUAAGUCGGGUUUGGAGAC - 22 |
Stem-loop(if miRNA) |
--           U         CC   C           A     A        CC           G  AU      A    A    UGU   CUCCAAACCCG CUUAGAAUG  CAG AUUCUACGACG UUUUU GGUCAUAA  GUCUUAGAAUG UG  CAUUCU AGAC GGUU   C   ||||||||||| |||||||||  ||| ||||||||||| ||||| ||||||||  ||||||||||| ||  |||||| |||| ||||   GAGGUUUGGGC GAAUCUUAC  GUU UAAGAUGCUGC AAAAA CCAGUAUU  CAGAAUCUUAC AC  GUAAGA UCUG CCAA   U CA           U         UU   A           C     C        AA           A  AC      C    C    CCC |
Stem-loop sequence | CUCCAAACCCGUCUUAGAAUGCCCAGCAUUCUACGACGAUUUUUAGGUCAUAACCGUCUUAGAAUGGUGAUCAUUCUAAGACAGGUUUGUCUCCCAACCCGUCUCAGAAUGCACAACAUUCUAAGACAAUUAUGACCCAAAAACCGUCGUAGAAUAUUGUUCAUUCUAAGUCGGGUUUGGAGAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014767461.1 |
|
2.5 | PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA | putative dual specificity protein phosphatase DSP8(LOC100787468) | coding protein | psRNATarget |