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BaseInfo

ncRNA ID novel_gma_miR6985
Species Glycine max
Class miRNA
Genome position Chr1:25658919-25658982 [+]
Reference genome Glycine_max_v2.0
Source SRR1451606
Length 24
Mature sequence(if miRNA) 1 - UUACGAAAUAACUGUCUUUGAAAG - 24
Stem-loop(if miRNA) --UUAC           C      AG   UUU
      GAAAUAACUGU UUUGAA  GUU   U
      ||||||||||| ||||||  |||   C
      CUUUAUUGGCA AAACUU  CAG   G
AUAAUA           U      -A   UUU
Stem-loop sequence UUACGAAAUAACUGUCUUUGAAAGGUUUUUUCGUUUGACAUUCAAAUACGGUUAUUUCAUAAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003539896.3
ncRNA:24   GAAAGUUUCUGUCAAUAAAGCAUU   1
  *||*=||||=|||||||||=||||
targets:1962   GUUGUAAAGGCAGUUAUUUUGUAA   1985

2.5 PREDICTED: Glycine max transcription activator GLK1-like (LOC100777595), mRNA transcription activator GLK1-like(LOC100777595) coding protein psRNATarget
BT094625.1
ncRNA:24   GAAA--GUUUCUGUCAAUAAAGCAUU   1
  |*||--||*|||||||*|||||||||
targets:573   CGUUGCCAUAGACAGUAAUUUCGUAA   598

2.5 Soybean clone JCVI-FLGm-5H18 unknown mRNA NA coding protein psRNATarget