ncRNA ID | novel_gma_miR6985 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:25658919-25658982 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451606 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUACGAAAUAACUGUCUUUGAAAG - 24 |
Stem-loop(if miRNA) |
--UUAC           C      AG   UUU       GAAAUAACUGU UUUGAA  GUU   U       ||||||||||| ||||||  |||   C       CUUUAUUGGCA AAACUU  CAG   G AUAAUA           U      -A   UUU |
Stem-loop sequence | UUACGAAAUAACUGUCUUUGAAAGGUUUUUUCGUUUGACAUUCAAAUACGGUUAUUUCAUAAUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003539896.3 |
|
2.5 | PREDICTED: Glycine max transcription activator GLK1-like (LOC100777595), mRNA | transcription activator GLK1-like(LOC100777595) | coding protein | psRNATarget | |||||||||
BT094625.1 |
|
2.5 | Soybean clone JCVI-FLGm-5H18 unknown mRNA | NA | coding protein | psRNATarget |