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BaseInfo

ncRNA ID	novel_gma_miR6978
Species	Glycine max
Class	miRNA
Genome position	Chr19:11005910-11006043 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451605;SRR1451606;SRR1451607;SRR1451615;SRR1451621
Length	24
Mature sequence(if miRNA)	111 - UAUAGGACCGAUGUAGAAUGUGUU - 134
Stem-loop(if miRNA)	--                                            ACA   U        AUCAUU   CACAUUCUACAUCGGUCCUAUACACAUAACCGUCUUAGAAUGUA   CAU CUAAGAUG      G   ||||||||||||||||||||||||||||||||||||||||||||   ||| ||||||||   GUGUAAGAUGUAGCCAGGAUAUGUGUGUUGGUAGAAUUUUACAU   GUA GAUUCUGC      C UU                                            AAA   U        CAACAA
Stem-loop sequence	CACAUUCUACAUCGGUCCUAUACACAUAACCGUCUUAGAAUGUAACACAUUCUAAGAUGAUCAUUGCAACAACCGUCUUAGUAUGAAAUACAUUUUAAGAUGGUUGUGUGUAUAGGACCGAUGUAGAAUGUGUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006598094.2	ncRNA:24   UUGU---GUAAGAUGUAGCCAGGAUAU   1   ||||---||||||||||||||=||||= targets:843   AACAUUGCAUUCUACAUCGGUUCUAUG   869 Target Full Sequence	2.5	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X20, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768221.1	ncRNA:24   UUGU---GUAAGAUGUAGCCAGGAUAU   1   ||||---||||||||||||||=||||= targets:956   AACAUUGCAUUCUACAUCGGUUCUAUG   982 Target Full Sequence	2.5	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X21, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768217.1	ncRNA:24   UUGU---GUAAGAUGUAGCCAGGAUAU   1   ||||---||||||||||||||=||||= targets:1116   AACAUUGCAUUCUACAUCGGUUCUAUG   1142 Target Full Sequence	2.5	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X9, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768216.1	ncRNA:24   UUGU---GUAAGAUGUAGCCAGGAUAU   1   ||||---||||||||||||||=||||= targets:1393   AACAUUGCAUUCUACAUCGGUUCUAUG   1419 Target Full Sequence	2.5	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X8, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768212.1	ncRNA:24   UUGU---GUAAGAUGUAGCCAGGAUAU   1   ||||---||||||||||||||=||||= targets:1556   AACAUUGCAUUCUACAUCGGUUCUAUG   1582 Target Full Sequence	2.5	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X1, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget