ncRNA ID | novel_gma_miR6967 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:45690191-45690318 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451605;SRR1451621 |
Length | 20 |
Mature sequence(if miRNA) | 109 - UCCUUGGGAUGCAGAUUAUC - 128 |
Stem-loop(if miRNA) |
--U   UG               CU    UAA        U   CAUU     AUCU     UUAUU    G    CCU  GGAUGCAGAUUAUCU  UCCU   CAUUUAAU AAU    UUAAC    UCCAC     CAAG C    |||  |||||||||||||||  ||||   |||||||| |||    |||||    |||||     ||||    GGA  UCUACGUCUAAUGGA  AGGA   GUGAGUUA UUA    AAUUG    AGGUG     GUUC U UUU   GU               AC    ---        -   ---U     ----     -----    U |
Stem-loop sequence | UCCUUGGGAUGCAGAUUAUCUCUUCCUUAACAUUUAAUUAAUCAUUUUAACAUCUUCCACUUAUUCAAGGCUUCUUGGUGGAGUUAAUAUUAUUGAGUGAGGACAAGGUAAUCUGCAUCUUGAGGUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003549614.3 |
|
2.0 | PREDICTED: Glycine max mitochondrial outer membrane protein porin 1-like (LOC100805522), mRNA | mitochondrial outer membrane protein porin 1-like(LOC100805522) | coding protein | psRNATarget | |||||||||
XM_003524910.3 |
|
2.0 | PREDICTED: Glycine max mitochondrial outer membrane protein porin 1-like (LOC100787061), mRNA | mitochondrial outer membrane protein porin 1-like(LOC100787061) | coding protein | psRNATarget |