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BaseInfo

ncRNA ID novel_gma_miR6955
Species Glycine max
Class miRNA
Genome position Chr16:13904635-13904691 [-]
Reference genome Glycine_max_v2.0
Source SRR1451605
Length 24
Mature sequence(if miRNA) 34 - UUUUUGUAGAAAACCGAUGUUAAU - 57
Stem-loop(if miRNA) -U        -                 
  UUUUGUAG AAAACCGAUGUUAAUAUA
  |||||||| |||||||||||||||||A
  AAAACGUC UUUUGGCUACAAUUGUAC
CC        A                 
Stem-loop sequence UUUUUGUAGAAAACCGAUGUUAAUAUAACAUGUUAACAUCGGUUUUACUGCAAAACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003535883.3
ncRNA:24   UAAUUGUAGCCAAAAGAUGUUUUU   1
  **|||||||*|||||||||||=||
targets:1168   CAUAACAUCCGUUUUCUACAAGAA   1191

2.5 PREDICTED: Glycine max uncharacterized LOC100811261 (LOC100811261), transcript variant X1, mRNA uncharacterized LOC100811261(LOC100811261) coding protein psRNATarget
XM_014763115.1
ncRNA:24   UAAUUGUAGCCAAAAGAUGUUUUU   1
  **|||||||*|||||||||||=||
targets:1168   CAUAACAUCCGUUUUCUACAAGAA   1191

2.5 PREDICTED: Glycine max uncharacterized LOC100811261 (LOC100811261), transcript variant X2, mRNA uncharacterized LOC100811261(LOC100811261) coding protein psRNATarget