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BaseInfo

ncRNA ID novel_gma_miR6949
Species Glycine max
Class miRNA
Genome position Chr10:16291928-16292074 [+]
Reference genome Glycine_max_v2.0
Source SRR1451605
Length 22
Mature sequence(if miRNA) 1 - ACACCAAUCUGUGCUUCUUCCU - 22
Stem-loop(if miRNA) --A               C      G    A                C     A   G      -         
   CACCAAUCUGUGCUU UUCCUU UCUA CAGCUCAAUAUCUUUC UUUCA CUU UGUUUU GUAAAUUACA
   ||||||||||||||| |||||| |||| |||||||||||||||| ||||| ||| |||||| |||||||||G
   GUGGUUAGGCACGGA GAGGAG AGAU GUCGAGUUAUAGAAAG AAAGU GGA ACGAAA CAUUUGAUGU
GUC               C      G    G                C     -   A      A         
Stem-loop sequence ACACCAAUCUGUGCUUCUUCCUUGUCUAACAGCUCAAUAUCUUUCCUUUCAACUUGUGUUUUGUAAAUUACAGUGUAGUUUACAAAAGCAAAGGUGAAACGAAAGAUAUUGAGCUGGUAGAGGAGGAGCAGGCACGGAUUGGUGCUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014769888.1
ncRNA:22   UCCUUCUUCGUGUCUAACCACA   1
  =*|||||||||||||*|||||*
targets:3438   GCGAAGAAGCACAGAGUGGUGA   3459

2.5 PREDICTED: Glycine max uncharacterized LOC100792447 (LOC100792447), mRNA uncharacterized LOC100792447(LOC100792447) coding protein psRNATarget