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BaseInfo

ncRNA ID novel_gma_miR6945
Species Glycine max
Class miRNA
Genome position Chr14:7013809-7013902 [+]
Reference genome Glycine_max_v2.0
Source SRR1451605
Length 22
Mature sequence(if miRNA) 73 - AUCAGCAUGCUUUAGUGAUCUC - 94
Stem-loop(if miRNA) --A         -         C        GG    U      GGAAA
   AUCACUAAA CAUGUUGAU AAAAGUUA  UAAC GAGUGA     U
   ||||||||| ||||||||| ||||||||  |||| ||||||
   UAGUGAUUU GUACGACUA UUUUCAAU  GUUG UUUAUU     G
CUC         C         U        --    -      AGAGA
Stem-loop sequence AAUCACUAAACAUGUUGAUCAAAAGUUAGGUAACUGAGUGAGGAAAUGAGAGAUUAUUUGUUGUAACUUUUUAUCAGCAUGCUUUAGUGAUCUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003532598.3
ncRNA:22   CU-CUA-GUGAUUUCGUACGACUA   1
  ||-|||-=||||||||||||||||
targets:3050   GAUGAUGUACUAAAGCAUGCUGAU   3073

3.0 PREDICTED: Glycine max small RNA 2'-O-methyltransferase-like (LOC100815299), mRNA small RNA 2'-O-methyltransferase-like(LOC100815299) coding protein psRNATarget