ncRNA ID | novel_gma_miR6943 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:17491021-17491153 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451605 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UUUAGUCCCUGAAGUUUACAUU - 22 |
Stem-loop(if miRNA) |
--                  C     A    -CC        AC          UU          C   UUUAGUCCCUGAAGUUUA AUUUU AUUC   AAAAGGUU  UGCCAUUAAA  UUUUUUAACU C   |||||||||||||||||| ||||| ||||   ||||||||  ||||||||||  |||||||||| G   AAAUCAGGGAUUUUAAAU UAAAA UAAG   UUUUCUAA  ACGGUAAUUU  AAGAAAUUGA U AA                  A     A    AUU        AA          -U          U |
Stem-loop sequence | UUUAGUCCCUGAAGUUUACAUUUUAAUUCCCAAAAGGUUACUGCCAUUAAAUUUUUUUUAACUCCGUUAGUUAAAGAAUUUUAAUGGCAAAAAUCUUUUUUAGAAUAAAAAUAUAAAUUUUAGGGACUAAAAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003533666.3 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC100803921 (LOC100803921), transcript variant X3, mRNA | uncharacterized LOC100803921(LOC100803921) | coding protein | psRNATarget |