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BaseInfo

ncRNA ID novel_gma_miR6941
Species Glycine max
Class miRNA
Genome position Chr14:16753211-16753272 [-]
Reference genome Glycine_max_v2.0
Source SRR1451605
Length 22
Mature sequence(if miRNA) 1 - UUAAAAGUUUUGUUUUGGGCCC - 22
Stem-loop(if miRNA) --    UU      U      U   -UCU A
  GUCC  GAUAAG UUUUUG UGU    G G
  ||||  |||||| |||||| |||    | U
  CGGG  UUGUUU GAAAAU AUA    C C
CC    UU      U      U   UAAU U
Stem-loop sequence GUCCUUGAUAAGUUUUUUGUUGUUCUGAGUCUCUAAUAUAUUAAAAGUUUUGUUUUGGGCCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006573081.2
ncRNA:22   CCCGGGUUUUGUUUUGAAAAUU   1
  ****|||||||||||||||*||
targets:1518   CAUACCAAAACAAAACUUUGAA   1539

2.5 PREDICTED: Glycine max uncharacterized LOC102660841 (LOC102660841), transcript variant X2, mRNA uncharacterized LOC102660841(LOC102660841) coding protein psRNATarget
XM_006573080.2
ncRNA:22   CCCGGGUUUUGUUUUGAAAAUU   1
  ****|||||||||||||||*||
targets:1605   CAUACCAAAACAAAACUUUGAA   1626

2.5 PREDICTED: Glycine max uncharacterized LOC102660841 (LOC102660841), transcript variant X1, mRNA uncharacterized LOC102660841(LOC102660841) coding protein psRNATarget