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BaseInfo

ncRNA ID	novel_gma_miR6938
Species	Glycine max
Class	miRNA
Genome position	Chr14:40839719-40839856 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451605
Length	24
Mature sequence(if miRNA)	115 - UAGAGAAUAACAUCAAAAGGACCU - 138
Stem-loop(if miRNA)	--  G     A                         G         --G   ACCCAUAACAUAAAGGUU   GU UUUUU AUGUUGUUCUCUAAUCAAAAUUGGA UUUUGCCUU   GUC                  G   || ||||| ||||||||||||||||||||||||| |||||||||   |||   CA GAAAA UACAAUAAGAGAUUAGUUUUAAUCU AAAAUGGAG   UUG                  A UC  G     C                         G         UAA   GUCACAACAGGAAAUUAC
Stem-loop sequence	GUGUUUUUAAUGUUGUUCUCUAAUCAAAAUUGGAGUUUUGCCUUGGUCACCCAUAACAUAAAGGUUGACAUUAAAGGACAACACUGGUUAAUGAGGUAAAAGUCUAAUUUUGAUUAGAGAAUAACAUCAAAAGGACCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014762806.1	ncRNA:24   UCCA----GGAAAACUACAAUAAGAGAU   1   |*||----|||||||||||||||=|||| targets:39   AUGUUGCCCCUUUUGAUGUUAUUUUCUA   66 Target Full Sequence	1.5	PREDICTED: Glycine max protein DETOXIFICATION 42-like (LOC100810327), mRNA	protein DETOXIFICATION 42-like(LOC100810327)	coding protein	psRNATarget
BT096909.1	ncRNA:24   UCCAGGAAAACUACAAUAAGAGAU   1   ***|||||||*||||||||||||* targets:1337   UUAUCCUUUUCAUGUUAUUCUCUU   1360 Target Full Sequence	2.0	Soybean clone JCVI-FLGm-25L8 unknown mRNA	NA	coding protein	psRNATarget
NM_001289231.1	ncRNA:24   UCCAGGAAAACUACAAUAAGAGAU   1   ***|||||||*||||||||||||* targets:1337   UUAUCCUUUUCAUGUUAUUCUCUU   1360 Target Full Sequence	2.0	Glycine max actin-11-like (LOC100792119), mRNA	actin-11-like(LOC100792119)	coding protein	psRNATarget
AK285830.1	ncRNA:24   UCCAGGAAAACUACAAUAAGAGAU   1   ***|||||||*||||||||||||* targets:1336   UUAUCCUUUUCAUGUUAUUCUCUU   1359 Target Full Sequence	2.0	Glycine max cDNA, clone: GMFL01-17-C16	NA	coding protein	psRNATarget
XM_006575183.2	ncRNA:24   UCCAGGAAAACUACAAUAAGAGAU   1   *|**|||||||||||||||=|||= targets:332   UGCCCCUUUUGAUGUUAUUUUCUG   355 Target Full Sequence	2.5	PREDICTED: Glycine max protein DETOXIFICATION 42-like (LOC100809975), mRNA	protein DETOXIFICATION 42-like(LOC100809975)	coding protein	psRNATarget