Search result

BaseInfo

ncRNA ID novel_gma_miR6936
Species Glycine max
Class miRNA
Genome position Chr13:32351528-32351599 [+]
Reference genome Glycine_max_v2.0
Source SRR1451605
Length 24
Mature sequence(if miRNA) 49 - GAGAAUGUUCAUCUCGGAAUGGAC - 72
Stem-loop(if miRNA) --        GA      U    G   CAA   GGG
  UCAUUUCG  AUGGAC UUCU AAA   AAU   A
  ||||||||  |||||| |||| |||   |||
  GGUAAGGC  UACUUG AAGA UUU   UUA   G
CA        UC      U    G   AGG   GUG
Stem-loop sequence UCAUUUCGGAAUGGACUUUCUGAAACAAAAUGGGAGGUGAUUGGAUUUGAGAAUGUUCAUCUCGGAAUGGAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003537276.2
ncRNA:24   CAGGUAAGGCUCUACUUGUAAGAG   1
  *|||*|*|=||||||||||||||=
targets:616   UUCCUUGCUGAGAUGAACAUUCUU   639

3.0 PREDICTED: Glycine max cation/H(+) antiporter 14-like (LOC100787550), mRNA cation/H(+) antiporter 14-like(LOC100787550) coding protein psRNATarget