ncRNA ID | novel_gma_miR6910 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:38834173-38834260 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451605;SRR1451607;SRR1451611 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UUCCGGAAGAAGAAUUUGUGAC - 22 |
Stem-loop(if miRNA) |
--   C                  AGAUUU          CUUUCCG   CAU AAUUCUUCUUCCGGAAGA      UUUCCGGAAA       A   ||| ||||||||||||||||||      ||||||||||   GUG UUAAGAAGAAGGCCUUUU      AAAGGCCUUU       A CA   U                  ------          CUCCAAA |
Stem-loop sequence | CAUCAAUUCUUCUUCCGGAAGAAGAUUUUUUCCGGAAACUUUCCGAAAAACCUCUUUCCGGAAAUUUUCCGGAAGAAGAAUUUGUGAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006573284.2 |
|
2.0 | PREDICTED: Glycine max aquaporin PIP1-2-like (LOC100781984), mRNA | aquaporin PIP1-2-like(LOC100781984) | coding protein | psRNATarget | |||||||||
BT098485.1 |
|
2.5 | Soybean clone JCVI-FLGm-12D21 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
XM_006602964.2 |
|
3.0 | PREDICTED: Glycine max disease resistance protein RPP13-like (LOC100780593), mRNA | disease resistance protein RPP13-like(LOC100780593) | coding protein | psRNATarget |