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BaseInfo

ncRNA ID novel_gma_miR6910
Species Glycine max
Class miRNA
Genome position Chr1:38834173-38834260 [-]
Reference genome Glycine_max_v2.0
Source SRR1451605;SRR1451607;SRR1451611
Length 22
Mature sequence(if miRNA) 1 - UUCCGGAAGAAGAAUUUGUGAC - 22
Stem-loop(if miRNA) --   C                  AGAUUU          CUUUCCG
  CAU AAUUCUUCUUCCGGAAGA      UUUCCGGAAA       A
  ||| ||||||||||||||||||      ||||||||||
  GUG UUAAGAAGAAGGCCUUUU      AAAGGCCUUU       A
CA   U                  ------          CUCCAAA
Stem-loop sequence CAUCAAUUCUUCUUCCGGAAGAAGAUUUUUUCCGGAAACUUUCCGAAAAACCUCUUUCCGGAAAUUUUCCGGAAGAAGAAUUUGUGAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006573284.2
ncRNA:22   CAGUGUUUAAGAAGAAGGCCUU   1
  *|||=*||||||||||||||||
targets:1652   UUCAUCAAUUCUUCUUCCGGAA   1673

2.0 PREDICTED: Glycine max aquaporin PIP1-2-like (LOC100781984), mRNA aquaporin PIP1-2-like(LOC100781984) coding protein psRNATarget
BT098485.1
ncRNA:22   CAGUGUUUAAGAAGAAGGCCUU   1
  **||||||||||||||||*||*
targets:393   UGCACAAAUUCUUCUUCCAGAU   414

2.5 Soybean clone JCVI-FLGm-12D21 unknown mRNA NA coding protein psRNATarget
XM_006602964.2
ncRNA:22   CAGUGU-UUAAGAAGAAGGCCUU   1
  **||||-=|||||||||||||||
targets:1538   AACACAUGAUUCUUCUUCCGGAA   1560

3.0 PREDICTED: Glycine max disease resistance protein RPP13-like (LOC100780593), mRNA disease resistance protein RPP13-like(LOC100780593) coding protein psRNATarget