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BaseInfo

ncRNA ID novel_gma_miR6908
Species Glycine max
Class miRNA
Genome position Chr11:28984559-28984675 [-]
Reference genome Glycine_max_v2.0
Source SRR1451605;SRR1451616
Length 24
Mature sequence(if miRNA) 94 - AACAUCGGUUUUCUGUAAAAAAAC - 117
Stem-loop(if miRNA) --     C      C         A            AA  U    CUAUU          U
  AACAU GGUUUU UGUAAAAAA CCGAUGUUAACG  UG GUUA     CAUCGGUUUU U
  ||||| |||||| ||||||||| ||||||||||||  || ||||     |||||||||| A
  UUGUA CCAAAA AUAUUUUUU GGCUACAAUUGC  AC CAAU     GUAGCCAAAA A
AA     A      -         -            --  C    ----U          A
Stem-loop sequence AACAUCGGUUUUCUGUAAAAAAACCGAUGUUAACGAAUGUGUUACUAUUCAUCGGUUUUUUAAAAAAACCGAUGUUAACCCACGUUAACAUCGGUUUUUUAUAAAAACCAAUGUUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006588840.2
ncRNA:24   CAAAAAAAUGUCUUUUGGCUACAA   1
  |*|||*|||=*|||||||||||||
targets:29   GGUUUCUUAUUGAAAACCGAUGUU   52

3.0 PREDICTED: Glycine max actin-related protein 7-like (LOC100803056), transcript variant X1, mRNA actin-related protein 7-like(LOC100803056) coding protein psRNATarget