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BaseInfo

ncRNA ID novel_gma_miR6898
Species Glycine max
Class miRNA
Genome position Chr9:37210666-37210752 [+]
Reference genome Glycine_max_v2.0
Source SRR1451605
Length 22
Mature sequence(if miRNA) 66 - AAUCAUCGUCGGAUUCUGAGGC - 87
Stem-loop(if miRNA) --  UG   -        C         -AUU      UUUUGA
  UU  GAA CUGAUGAU GUUUUGGAA    UUUGCA      A
  ||  ||| |||||||| |||||||||    ||||||      U
  GA  CUU GGCUGCUA UAAGAUUUU    GAAUGU      A
CG  GU   A        C         GCUU      UUUGUG
Stem-loop sequence UUUGGAACUGAUGAUCGUUUUGGAAAUUUUUGCAUUUUGAAUAGUGUUUUGUAAGUUCGUUUUAGAAUCAUCGUCGGAUUCUGAGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006574945.2
ncRNA:22   CGGAGUCUUAGGCUGCUACUAA   1
  ***|||||*||=||||||||||
targets:1052   AGAUCAGAUUCUGACGAUGAUU   1073

2.5 PREDICTED: Glycine max LAG1 longevity assurance homolog 2-like (LOC100803951), transcript variant X2, mRNA LAG1 longevity assurance homolog 2-like(LOC100803951) coding protein psRNATarget
XM_006574944.2
ncRNA:22   CGGAGUCUUAGGCUGCUACUAA   1
  ***|||||*||=||||||||||
targets:1065   AGAUCAGAUUCUGACGAUGAUU   1086

2.5 PREDICTED: Glycine max LAG1 longevity assurance homolog 2-like (LOC100803951), transcript variant X1, mRNA LAG1 longevity assurance homolog 2-like(LOC100803951) coding protein psRNATarget
XM_006574946.2
ncRNA:22   CGGAGUCUUAGGCUGCUACUAA   1
  ***|||||*||=||||||||||
targets:1083   AGAUCAGAUUCUGACGAUGAUU   1104

2.5 PREDICTED: Glycine max LAG1 longevity assurance homolog 2-like (LOC100803951), transcript variant X3, mRNA LAG1 longevity assurance homolog 2-like(LOC100803951) coding protein psRNATarget