ncRNA ID | novel_gma_miR6898 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr9:37210666-37210752 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451605 |
Length | 22 |
Mature sequence(if miRNA) | 66 - AAUCAUCGUCGGAUUCUGAGGC - 87 |
Stem-loop(if miRNA) |
--  UG   -        C         -AUU      UUUUGA   UU  GAA CUGAUGAU GUUUUGGAA    UUUGCA      A   ||  ||| |||||||| |||||||||    ||||||      U   GA  CUU GGCUGCUA UAAGAUUUU    GAAUGU      A CG  GU   A        C         GCUU      UUUGUG |
Stem-loop sequence | UUUGGAACUGAUGAUCGUUUUGGAAAUUUUUGCAUUUUGAAUAGUGUUUUGUAAGUUCGUUUUAGAAUCAUCGUCGGAUUCUGAGGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006574945.2 |
|
2.5 | PREDICTED: Glycine max LAG1 longevity assurance homolog 2-like (LOC100803951), transcript variant X2, mRNA | LAG1 longevity assurance homolog 2-like(LOC100803951) | coding protein | psRNATarget | |||||||||
XM_006574944.2 |
|
2.5 | PREDICTED: Glycine max LAG1 longevity assurance homolog 2-like (LOC100803951), transcript variant X1, mRNA | LAG1 longevity assurance homolog 2-like(LOC100803951) | coding protein | psRNATarget | |||||||||
XM_006574946.2 |
|
2.5 | PREDICTED: Glycine max LAG1 longevity assurance homolog 2-like (LOC100803951), transcript variant X3, mRNA | LAG1 longevity assurance homolog 2-like(LOC100803951) | coding protein | psRNATarget |