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BaseInfo

ncRNA ID novel_gma_miR6896
Species Glycine max
Class miRNA
Genome position Chr8:10859605-10859718 [+]
Reference genome Glycine_max_v2.0
Source SRR1451605
Length 21
Mature sequence(if miRNA) 1 - UGGACUAAAUAUAGAUAUGCU - 21
Stem-loop(if miRNA) --U   C            UGCUUUU     ---     UAAAUA      U      UGUAA
   GGA UAAAUAUAGAUA       AAUAC   UAACA      UAUUCA GUGCAU     A
   ||| ||||||||||||       |||||   |||||      |||||| ||||||     A
   CUU GUUUAUAUUUGU       UUAUG   AUUGU      GUAAGU CAUGUA     A
UCG   U            -----CU     UUU     ----UC      -      UAAAA
Stem-loop sequence UGGACUAAAUAUAGAUAUGCUUUUAAUACUAACAUAAAUAUAUUCAUGUGCAUUGUAAAAAAAAAUAUGUACUGAAUGCUUGUUAUUUGUAUUUCUGUUUAUAUUUGUUUCGCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003551923.3
ncRNA:21   UCGUAUAGAUAUAAAUCAGGU   1
  **|||*|=|||||||||||||
targets:26   UACAUUUUUAUAUUUAGUCCA   46

2.0 PREDICTED: Glycine max E3 ubiquitin-protein ligase RGLG2 (LOC100798816), transcript variant X2, mRNA E3 ubiquitin-protein ligase RGLG2(LOC100798816) coding protein psRNATarget
XM_006601859.2
ncRNA:21   UCGUAUAGAUAUAAAUCAGGU   1
  **|||*|=|||||||||||||
targets:28   UACAUUUUUAUAUUUAGUCCA   48

2.0 PREDICTED: Glycine max E3 ubiquitin-protein ligase RGLG2 (LOC100798816), transcript variant X1, mRNA E3 ubiquitin-protein ligase RGLG2(LOC100798816) coding protein psRNATarget
XM_006601860.2
ncRNA:21   UCGUAUAGAUAUAAAUCAGGU   1
  **|||*|=|||||||||||||
targets:27   UACAUUUUUAUAUUUAGUCCA   47

2.0 PREDICTED: Glycine max E3 ubiquitin-protein ligase RGLG2 (LOC100798816), transcript variant X3, mRNA E3 ubiquitin-protein ligase RGLG2(LOC100798816) coding protein psRNATarget