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BaseInfo

ncRNA ID	novel_gma_miR6891
Species	Glycine max
Class	miRNA
Genome position	Chr7:18557674-18557788 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451605
Length	24
Mature sequence(if miRNA)	1 - UUUUCUGUUUUUAUUUUCUGAAAA - 24
Stem-loop(if miRNA)	--     --                  ACUAUUUUCAUUUUA       U       UGAAAA  U   UUUUC  UGUUUUUAUUUUCUGAAA               AAAAAAU AGAAUUC      CA G   |||||  ||||||||||||||||||               ||||||| |||||||      ||   GGAAG  ACAAAAAUAAAGGACUUU               UUUUUUA UCUUGAG      GU U GA     UC                  -------------CG       U       --UUCG  U
Stem-loop sequence	UUUUCUGUUUUUAUUUUCUGAAAACUAUUUUCAUUUUAAAAAAAUUAGAAUUCUGAAAACAUGUUUGGCUUGAGUUCUUAUUUUUUGCUUUCAGGAAAUAAAAACACUGAAGGAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006580262.2	ncRNA:24   AAAAGUCUUUUAUUUUUGUCUUUU   1   ***|||||||*||||||||||||| targets:8   ACGUCAGAAAUUAAAAACAGAAAA   31 Target Full Sequence	1.0	PREDICTED: Glycine max carbamoyl-phosphate synthase small chain, chloroplastic-like (LOC100776931), transcript variant X2, mRNA	carbamoyl-phosphate synthase small chain, chloroplastic-like(LOC100776931)	coding protein	psRNATarget
XM_003525056.3	ncRNA:24   AAAAGUCUUUUAUUUUUGUCUUUU   1   ***|||||||*||||||||||||| targets:5   ACGUCAGAAAUUAAAAACAGAAAA   28 Target Full Sequence	1.0	PREDICTED: Glycine max carbamoyl-phosphate synthase small chain, chloroplastic-like (LOC100776931), transcript variant X1, mRNA	carbamoyl-phosphate synthase small chain, chloroplastic-like(LOC100776931)	coding protein	psRNATarget
XM_006595558.2	ncRNA:24   AAAAGUCUUUUAUUUUUGUCUUUU   1   ||||||||*||||||||*|||||| targets:3   UUUUCAGAUAAUAAAAAGAGAAAA   26 Target Full Sequence	2.5	PREDICTED: Glycine max pyruvate dehydrogenase E1 component subunit beta, mitochondrial-like (LOC100817577), transcript variant X1, mRNA	pyruvate dehydrogenase E1 component subunit beta, mitochondrial-like(LOC100817577)	coding protein	psRNATarget
XM_006575153.2	ncRNA:24   AAAAGUCUUUUAUUUUUGUCUUUU   1   **||||||=||||||||*|||||| targets:2970   AAUUCAGAGAAUAAAAAAAGAAAA   2993 Target Full Sequence	2.5	PREDICTED: Glycine max putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial (LOC100797551), transcript variant X2, mRNA	putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial(LOC100797551)	coding protein	psRNATarget
XM_003518014.3	ncRNA:24   AAAAGUCUUUUAUUUUUGUCUUUU   1   **||||||=||||||||*|||||| targets:3074   AAUUCAGAGAAUAAAAAAAGAAAA   3097 Target Full Sequence	2.5	PREDICTED: Glycine max putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial (LOC100797551), transcript variant X1, mRNA	putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial(LOC100797551)	coding protein	psRNATarget