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BaseInfo

ncRNA ID	novel_gma_miR6883
Species	Glycine max
Class	miRNA
Genome position	Chr6:41872822-41872862 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451605
Length	21
Mature sequence(if miRNA)	21 - UCCAUUAGUUAAUUUGUAGAA - 41
Stem-loop(if miRNA)	--           --    AA   UUAUAAAUUAA  AAUG  C   |||||||||||  ||||  U   GAUGUUUAAUU  UUAC  C AA           GA    CU
Stem-loop sequence	UUAUAAAUUAAAAUGAACUCUCCAUUAGUUAAUUUGUAGAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006603606.2	ncRNA:21   AAGAUGUUUAAUUGAUUACCU   1   ||||||||||||=|||||||* targets:1532   UUCUACAAAUUAGCUAAUGGU   1552 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100500460 (LOC100500460), transcript variant X1, mRNA	uncharacterized LOC100500460(LOC100500460)	coding protein	psRNATarget
XM_006603608.2	ncRNA:21   AAGAUGUUUAAUUGAUUACCU   1   ||||||||||||=|||||||* targets:1542   UUCUACAAAUUAGCUAAUGGU   1562 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100500460 (LOC100500460), transcript variant X3, mRNA	uncharacterized LOC100500460(LOC100500460)	coding protein	psRNATarget
XM_014763080.1	ncRNA:21   AAGAUGUUUAAUUGAUUACCU   1   ||||||||||||=|||||||* targets:3635   UUCUACAAAUUAGCUAAUGGC   3655 Target Full Sequence	2.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X6, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763076.1	ncRNA:21   AAGAUGUUUAAUUGAUUACCU   1   ||||||||||||=|||||||* targets:3740   UUCUACAAAUUAGCUAAUGGC   3760 Target Full Sequence	2.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X2, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763077.1	ncRNA:21   AAGAUGUUUAAUUGAUUACCU   1   ||||||||||||=|||||||* targets:3871   UUCUACAAAUUAGCUAAUGGC   3891 Target Full Sequence	2.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X3, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763079.1	ncRNA:21   AAGAUGUUUAAUUGAUUACCU   1   ||||||||||||=|||||||* targets:3883   UUCUACAAAUUAGCUAAUGGC   3903 Target Full Sequence	2.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X5, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763075.1	ncRNA:21   AAGAUGUUUAAUUGAUUACCU   1   ||||||||||||=|||||||* targets:3972   UUCUACAAAUUAGCUAAUGGC   3992 Target Full Sequence	2.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X1, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget