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BaseInfo

ncRNA ID novel_gma_miR6877
Species Glycine max
Class miRNA
Genome position Chr6:44108009-44108115 [+]
Reference genome Glycine_max_v2.0
Source SRR1451605
Length 20
Mature sequence(if miRNA) 1 - CAUCGGUUUUUAAAAAAAAA - 20
Stem-loop(if miRNA) --            AA                CG    ---UU           G
  CAUCGGUUUUUA  AAAAAACCGAUGUUAA  UAUA     ACAUUGGUUUU U
  ||||||||||||  ||||||||||||||||  ||||     ||||||||||| A
  GUAGUCAAAAAU  UUUUUUGGCUACAAUU  AUAU     UGUAGCCAAAA U
CU            -A                AU    UCAAU           A
Stem-loop sequence CAUCGGUUUUUAAAAAAAAACCGAUGUUAACGUAUAUUACAUUGGUUUUGUAUAAAAACCGAUGUUAACUUAUAUAUUAACAUCGGUUUUUUAUAAAAACUGAUGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014764817.1
ncRNA:20   AAAAAAAAAUUUUUGGCUAC   1
  *||||*|||||||||=||||
targets:42   GUUUUAUUUAAAAACUGAUG   61

2.5 PREDICTED: Glycine max uncharacterized LOC102659453 (LOC102659453), mRNA uncharacterized LOC102659453(LOC102659453) coding protein psRNATarget