ncRNA ID | novel_gma_miR6877 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr6:44108009-44108115 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451605 |
Length | 20 |
Mature sequence(if miRNA) | 1 - CAUCGGUUUUUAAAAAAAAA - 20 |
Stem-loop(if miRNA) |
--            AA                CG    ---UU           G   CAUCGGUUUUUA  AAAAAACCGAUGUUAA  UAUA     ACAUUGGUUUU U   ||||||||||||  ||||||||||||||||  ||||     ||||||||||| A   GUAGUCAAAAAU  UUUUUUGGCUACAAUU  AUAU     UGUAGCCAAAA U CU            -A                AU    UCAAU           A |
Stem-loop sequence | CAUCGGUUUUUAAAAAAAAACCGAUGUUAACGUAUAUUACAUUGGUUUUGUAUAAAAACCGAUGUUAACUUAUAUAUUAACAUCGGUUUUUUAUAAAAACUGAUGUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014764817.1 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC102659453 (LOC102659453), mRNA | uncharacterized LOC102659453(LOC102659453) | coding protein | psRNATarget |