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BaseInfo

ncRNA ID	novel_gma_miR6876
Species	Glycine max
Class	miRNA
Genome position	Chr5:23509767-23509992 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451605
Length	24
Mature sequence(if miRNA)	1 - UUUAAAAAACCGAUGUUAACUGUC - 24
Stem-loop(if miRNA)	--CC         A           -             -UU                 C    --CAA           ------------------U  CAAUAGUAACACAUUCGUUAACA     GUUAACAUC GUUUUUUGAAA AACCGAUGUUAAC   GGUUAACAUCGGUUUUU AUAA     CCGAUGUUAAC                   GU                       U     ||||||||| ||||||||||| |||||||||||||   ||||||||||||||||| ||||     |||||||||||                   ||                       C     CAAUUGUAG CAAAAAAUUUU UUGGCUACAAUUG   CCAAUUGUAGCCAAAAA UAUU     GGCUACAAUUG                   CA                       G CUGU         C           A             CAC                 -    UUUUG           CUUACACAAUAAUAACUGU  AUUGUAGCCAAAAAUAUUUUUUA
Stem-loop sequence	CCGUUAACAUCAGUUUUUUGAAAAACCGAUGUUAACUUGGUUAACAUCGGUUUUUCAUAACAACCGAUGUUAACUGUCAAUAGUAACACAUUCGUUAACAUCGAUUUUUUAUAAAAACCGAUGUUAACUGUCAAUAAUAACACAUUCGUUAACAUCGGGUUUUUUAUAAAAACCGAUGUUAACCCACGUUAACAUCGGUUAUUUUAAAAAACCGAUGUUAACUGUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB171004.1	ncRNA:24   CUGUCAAUUGUAGCCAAAAAAUUU   1   ||||*||||||||||||||||||| targets:15   GACAUUUAACAUCGGUUUUUUAAA   38 Target Full Sequence	0.0	Sequence 8668 from Patent EP2559767	NA	coding protein	psRNATarget
JB171004.1	ncRNA:24   CUGUCAAUUGUAGCCAAAAAAUUU   1   ||||*||||||||||||||||||| targets:56   GACAUUUAACAUCGGUUUUUUAAA   79 Target Full Sequence	0.0	Sequence 8668 from Patent EP2559767	NA	coding protein	psRNATarget
JB171004.1	ncRNA:24   CUGUCAAUUGUAGCCAAAAAAUUU   1   ||||*||||||||||||||||||| targets:157   GACAUUUAACAUCGGUUUUUUAAA   180 Target Full Sequence	0.0	Sequence 8668 from Patent EP2559767	NA	coding protein	psRNATarget
JB171004.1	ncRNA:24   CUGUCAAUUGUAGCCAAAAAAUUU   1   *|||*||||||||||||||||||| targets:116   AACAUUUAACAUCGGUUUUUUAAA   139 Target Full Sequence	0.0	Sequence 8668 from Patent EP2559767	NA	coding protein	psRNATarget
HI410543.1	ncRNA:24   CUGUCAAUUGUAGCCAAAAAAUUU   1   ||||*||||||||||||||||||| targets:15   GACAUUUAACAUCGGUUUUUUAAA   38 Target Full Sequence	0.0	Sequence 8668 from Patent EP2074227	NA	coding protein	psRNATarget
HI410543.1	ncRNA:24   CUGUCAAUUGUAGCCAAAAAAUUU   1   ||||*||||||||||||||||||| targets:56   GACAUUUAACAUCGGUUUUUUAAA   79 Target Full Sequence	0.0	Sequence 8668 from Patent EP2074227	NA	coding protein	psRNATarget
HI410543.1	ncRNA:24   CUGUCAAUUGUAGCCAAAAAAUUU   1   ||||*||||||||||||||||||| targets:157   GACAUUUAACAUCGGUUUUUUAAA   180 Target Full Sequence	0.0	Sequence 8668 from Patent EP2074227	NA	coding protein	psRNATarget
HI410543.1	ncRNA:24   CUGUCAAUUGUAGCCAAAAAAUUU   1   *|||*||||||||||||||||||| targets:116   AACAUUUAACAUCGGUUUUUUAAA   139 Target Full Sequence	0.0	Sequence 8668 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242673.1	ncRNA:24   CUGUCAAUUGUAGCCAAAAAAUUU   1   ||||*||||||||||||||||||| targets:15   GACAUUUAACAUCGGUUUUUUAAA   38 Target Full Sequence	0.0	Sequence 8668 from Patent EP2985353	NA	coding protein	psRNATarget
LQ242673.1	ncRNA:24   CUGUCAAUUGUAGCCAAAAAAUUU   1   ||||*||||||||||||||||||| targets:56   GACAUUUAACAUCGGUUUUUUAAA   79 Target Full Sequence	0.0	Sequence 8668 from Patent EP2985353	NA	coding protein	psRNATarget
LQ242673.1	ncRNA:24   CUGUCAAUUGUAGCCAAAAAAUUU   1   ||||*||||||||||||||||||| targets:157   GACAUUUAACAUCGGUUUUUUAAA   180 Target Full Sequence	0.0	Sequence 8668 from Patent EP2985353	NA	coding protein	psRNATarget
LQ242673.1	ncRNA:24   CUGUCAAUUGUAGCCAAAAAAUUU   1   *|||*||||||||||||||||||| targets:116   AACAUUUAACAUCGGUUUUUUAAA   139 Target Full Sequence	0.0	Sequence 8668 from Patent EP2985353	NA	coding protein	psRNATarget