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BaseInfo

ncRNA ID novel_gma_miR6875
Species Glycine max
Class miRNA
Genome position Chr12:35070020-35070096 [+]
Reference genome Glycine_max_v2.0
Source SRR1292928;SRR1451621;SRR1451622;SRR1451623
Length 24
Mature sequence(if miRNA) 1 - ACACCAACUAACAGUAGACUUGAC - 24
Stem-loop(if miRNA) ---A      CU      A A    ---A  -CC    A  U
    CACCAA  AACAGU G CUUG    CA   UCUA UG A
    ||||||  |||||| | ||||    ||   |||| ||
    GUGGUU  UUGUUA C GAAC    GU   AGAU AC U
CCUC      AC      A -    AACC  UUC    -  U
Stem-loop sequence ACACCAACUAACAGUAGACUUGACACCUCUAAUGUAUUCAUAGACUUUGCCAACAAGCAAUUGUUCAUUGGUGCUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014775240.1
ncRNA:24   CAGUUCAGAUGACAAUCAACCACA   1
  *|||||*|||||*|||||||||||
targets:598   AUCAAGCCUACUAUUAGUUGGUGU   621

2.5 PREDICTED: Glycine max uncharacterized LOC100786155 (LOC100786155), transcript variant X2, mRNA uncharacterized LOC100786155(LOC100786155) coding protein psRNATarget