ncRNA ID | novel_gma_miR6868 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr4:20559654-20559797 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451605 |
Length | 24 |
Mature sequence(if miRNA) | 121 - AACAUCGGUUUUCUGUAAAAAAAC - 144 |
Stem-loop(if miRNA) |
---        AA      A          AACU               G     AU          GAA   G U    UUUUUACA  AAAACC AUGUUAACGU    UAACAUCGAUUUUUU GAAAA  CGAUGUUAGC   UGU U A    ||||||||  |||||| ||||||||||    ||||||||||||||| |||||  ||||||||||   ||| | A    AAAAAUGU  UUUUGG UACAAUUGCA    AUUGUAGCUAAAAAA UUUUU  GUUACAAUUG   ACA G U CAA        -C      C          ----               G     GG          ---   G U |
Stem-loop sequence | UUUUUACAAAAAAACCAAUGUUAACGUAACUUAACAUCGAUUUUUUGGAAAAAUCGAUGUUAGCGAAUGUGUUAAUUGGACAGUUAACAUUGGGUUUUUGAAAAAAUCGAUGUUAACGUUAACAUCGGUUUUCUGUAAAAAAAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006588840.2 |
|
3.0 | PREDICTED: Glycine max actin-related protein 7-like (LOC100803056), transcript variant X1, mRNA | actin-related protein 7-like(LOC100803056) | coding protein | psRNATarget |