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BaseInfo

ncRNA ID	novel_gma_miR6860
Species	Glycine max
Class	miRNA
Genome position	Chr3:2822395-2822506 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451605
Length	21
Mature sequence(if miRNA)	1 - UGCCUUCUCAUCAUCCAUCCA - 21
Stem-loop(if miRNA)	--  C            C     U    U   AUCCAUCUCAUCA    A  -   CAUCAUC   UG CUUCUCAUCAUC AUCCA CUUG AGG             CAAC AG GCU       A   || |||||||||||| ||||| |||| |||             |||| || |||   AC GAAGAGUAGUAG UAGGU GAAC UCC             GUUG UC UGA       A UG  A            U     U    U   -------------    A  A   AUCCUAC
Stem-loop sequence	UGCCUUCUCAUCAUCCAUCCAUCUUGUAGGAUCCAUCUCAUCACAACAAGGCUCAUCAUCAACAUCCUAAGUACUAGUUGCCUUCAAGUUGGAUUGAUGAUGAGAAGACAGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003554070.3	ncRNA:21   ACCUACCUACUACUCUUCCGU   1   ***|||||||||||||||||* targets:798   ACUAUGGAUGAUGAGAAGGCU   818 Target Full Sequence	2.0	PREDICTED: Glycine max cytochrome P450 82A4-like (LOC100804153), mRNA	cytochrome P450 82A4-like(LOC100804153)	coding protein	psRNATarget
XM_003554077.3	ncRNA:21   ACCUACCUACUACUCUUCCGU   1   ***|||||||||||||||||* targets:696   ACUAUGGAUGAUGAGAAGGCU   716 Target Full Sequence	2.0	PREDICTED: Glycine max cytochrome P450 82A4-like (LOC100807699), mRNA	cytochrome P450 82A4-like(LOC100807699)	coding protein	psRNATarget
AK287410.1	ncRNA:21   ACCUACCUACUACUCUUCCGU   1   |*|||||||||||||||*||* targets:927   UUGAUGGAUGAUGAGAAUGCC   947 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-52-L02	NA	coding protein	psRNATarget
BT096743.1	ncRNA:21   ACCUACCUACUACUCUUCCGU   1   |*|||||||||||||||*||* targets:945   UUGAUGGAUGAUGAGAAUGCC   965 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-25D10 unknown mRNA	NA	coding protein	psRNATarget
NM_001255493.1	ncRNA:21   ACCUACCUACUACUCUUCCGU   1   |*|||||||||||||||*||* targets:945   UUGAUGGAUGAUGAGAAUGCC   965 Target Full Sequence	2.5	Glycine max 26S proteasome non-ATPase regulatory subunit 4-like (LOC100803975), mRNA	26S proteasome non-ATPase regulatory subunit 4-like(LOC100803975)	coding protein	psRNATarget
XM_006573487.2	ncRNA:21   ACCUACCUACUACUCUUCCGU   1   |*|||||||||||||||*||* targets:987   UUGAUGGAUGAUGAGAAUGCC   1007 Target Full Sequence	2.5	PREDICTED: Glycine max 26S proteasome non-ATPase regulatory subunit 4 homolog (LOC100814594), transcript variant X3, mRNA	26S proteasome non-ATPase regulatory subunit 4 homolog(LOC100814594)	coding protein	psRNATarget
XM_006573488.2	ncRNA:21   ACCUACCUACUACUCUUCCGU   1   |*|||||||||||||||*||* targets:960   UUGAUGGAUGAUGAGAAUGCC   980 Target Full Sequence	2.5	PREDICTED: Glycine max 26S proteasome non-ATPase regulatory subunit 4 homolog (LOC100814594), transcript variant X4, mRNA	26S proteasome non-ATPase regulatory subunit 4 homolog(LOC100814594)	coding protein	psRNATarget
XM_003517120.3	ncRNA:21   ACCUACCUACUACUCUUCCGU   1   |*|||||||||||||||*||* targets:986   UUGAUGGAUGAUGAGAAUGCC   1006 Target Full Sequence	2.5	PREDICTED: Glycine max 26S proteasome non-ATPase regulatory subunit 4 homolog (LOC100814594), transcript variant X1, mRNA	26S proteasome non-ATPase regulatory subunit 4 homolog(LOC100814594)	coding protein	psRNATarget
XM_014775690.1	ncRNA:21   ACCUACCUACUACUCUUCCGU   1   |*|||||||||||||||*||* targets:1041   UUGAUGGAUGAUGAGAAUGCC   1061 Target Full Sequence	2.5	PREDICTED: Glycine max 26S proteasome non-ATPase regulatory subunit 4 homolog (LOC100814594), transcript variant X2, mRNA	26S proteasome non-ATPase regulatory subunit 4 homolog(LOC100814594)	coding protein	psRNATarget
XM_006593544.2	ncRNA:21   ACCUACCUACUACUCUUCCGU   1   ***|||||||||||*|||||| targets:236   AAAAUGGAUGAUGAUAAGGCA   256 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100779418 (LOC100779418), transcript variant X2, mRNA	uncharacterized LOC100779418(LOC100779418)	coding protein	psRNATarget
XM_006593543.2	ncRNA:21   ACCUACCUACUACUCUUCCGU   1   ***|||||||||||*|||||| targets:234   AAAAUGGAUGAUGAUAAGGCA   254 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100779418 (LOC100779418), transcript variant X1, mRNA	uncharacterized LOC100779418(LOC100779418)	coding protein	psRNATarget
XM_003546576.3	ncRNA:21   ACCUACCUACUACUCUUCCGU   1   *****|||||||||||||||| targets:638   ACUUCGGAUGAUGAGAAGGCA   658 Target Full Sequence	3.0	PREDICTED: Glycine max cytochrome P450 82A2-like (LOC100782866), mRNA	cytochrome P450 82A2-like(LOC100782866)	coding protein	psRNATarget
Y10491.1	ncRNA:21   ACCUACCUACUACUCUUCCGU   1   *****|||||||||||||||| targets:643   ACUUCGGAUGAUGAGAAGGCA   663 Target Full Sequence	3.0	G.max mRNA for putative cytochrome P450, clone CP4	NA	coding protein	psRNATarget
NM_001253148.1	ncRNA:21   ACCUACCUACUACUCUUCCGU   1   *****|||||||||||||||| targets:643   ACUUCGGAUGAUGAGAAGGCA   663 Target Full Sequence	3.0	Glycine max cytochrome P450 82A2-like (CYP82A2), mRNA	cytochrome P450 82A2-like(CYP82A2)	coding protein	psRNATarget