ncRNA ID | novel_gma_miR6859 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr3:6221593-6221727 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451605 |
Length | 20 |
Mature sequence(if miRNA) | 116 - UUUUUACGACGGUUAUACAC - 135 |
Stem-loop(if miRNA) |
--                ACACAC    A          UUAUAGAUAUACAA      C          ACG   UUUUUACGACGGUUAU      AACC UCUUAGAAAG              ACUAUA UAAGACGGUU   G   ||||||||||||||||      |||| ||||||||||              |||||| ||||||||||   GAAGAUGCUGCCAAUA      UUGG AGAAUCUUUC              UGAUAU AUUCUGCCAA   A UG                CACAAA    C          -----------UAC      A          AAA |
Stem-loop sequence | UUUUUACGACGGUUAUACACACAACCAUCUUAGAAAGUUAUAGAUAUACAAACUAUACUAAGACGGUUACGGAAAAAACCGUCUUAAUAUAGUCAUCUUUCUAAGACGGUUAAACACAUAACCGUCGUAGAAGGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014773514.1 |
|
0.0 | PREDICTED: Glycine max uncharacterized LOC106798042 (LOC106798042), transcript variant X1, mRNA | uncharacterized LOC106798042(LOC106798042) | coding protein | psRNATarget | |||||||||
XM_014773514.1 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC106798042 (LOC106798042), transcript variant X1, mRNA | uncharacterized LOC106798042(LOC106798042) | coding protein | psRNATarget |