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BaseInfo

ncRNA ID novel_gma_miR6849
Species Glycine max
Class miRNA
Genome position Chr2:27837678-27837844 [-]
Reference genome Glycine_max_v2.0
Source SRR1451605;SRR1451621
Length 24
Mature sequence(if miRNA) 144 - AUUAUACAAUAACUUGACUGGUGU - 167
Stem-loop(if miRNA) --           A  -     -G        C  GAA   A       UGA   AA UG   -AAAGAAAA  GUA       AA
  AUUAUACAAUA CU UGACU  GUGUUUAU UU   AAA AUGUUUA   GCA  G  UUG         AU   AGGUUCC  G
  ||||||||||| || |||||  |||||||| ||   ||| |||||||   |||  |  |||         ||   |||||||
  UAAUAUGUUAU GG GCUGG  UAUGAAUA AA   UUU UGCAAAU   UGU  U  GAU         UA   UCCAAGG  U
CU           G  U     AG        C  -AG   G       -UG   AA GU   GUUAAAUUG  AAA       AU
Stem-loop sequence AUUAUACAAUAACUUGACUGGUGUUUAUCUUGAAAAAAAUGUUUAUGAGCAAAGUGUUGAAAGAAAAAUGUAAGGUUCCAAGUUAGGAACCUAAAAUGUUAAAUUGUAGUGUAAUGUGUUAAACGUGUUUGAAACAUAAGUAUGAGGUCGUGGGUAUUGUAUAAUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006577887.2
ncRNA:24   UGUGGUCAGUUCAAUAACAUAUUA   1
  *||=|||*==||||||||||||||
targets:791   CCAUCAGAUGAGUUAUUGUAUAAU   814

3.0 PREDICTED: Glycine max uncharacterized LOC100812901 (LOC100812901), mRNA uncharacterized LOC100812901(LOC100812901) coding protein psRNATarget