ncRNA ID | novel_gma_miR6849 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr2:27837678-27837844 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451605;SRR1451621 |
Length | 24 |
Mature sequence(if miRNA) | 144 - AUUAUACAAUAACUUGACUGGUGU - 167 |
Stem-loop(if miRNA) |
--           A  -     -G        C  GAA   A       UGA   AA UG   -AAAGAAAA  GUA       AA   AUUAUACAAUA CU UGACU  GUGUUUAU UU   AAA AUGUUUA   GCA  G  UUG         AU   AGGUUCC  G   ||||||||||| || |||||  |||||||| ||   ||| |||||||   |||  |  |||         ||   |||||||   UAAUAUGUUAU GG GCUGG  UAUGAAUA AA   UUU UGCAAAU   UGU  U  GAU         UA   UCCAAGG  U CU           G  U     AG        C  -AG   G       -UG   AA GU   GUUAAAUUG  AAA       AU |
Stem-loop sequence | AUUAUACAAUAACUUGACUGGUGUUUAUCUUGAAAAAAAUGUUUAUGAGCAAAGUGUUGAAAGAAAAAUGUAAGGUUCCAAGUUAGGAACCUAAAAUGUUAAAUUGUAGUGUAAUGUGUUAAACGUGUUUGAAACAUAAGUAUGAGGUCGUGGGUAUUGUAUAAUUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006577887.2 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC100812901 (LOC100812901), mRNA | uncharacterized LOC100812901(LOC100812901) | coding protein | psRNATarget |