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BaseInfo

ncRNA ID novel_gma_miR6846
Species Glycine max
Class miRNA
Genome position Chr3:8726893-8726946 [+]
Reference genome Glycine_max_v2.0
Source SRR1451604
Length 24
Mature sequence(if miRNA) 31 - UUUUAAGACGGUUUUUCUAAGAAC - 54
Stem-loop(if miRNA) --    UC                  U
  UCUU  AAAAACUGUCUUAGAAAG A
  ||||  ||||||||||||||||||
  AGAA  UUUUUGGCAGAAUUUUUC U
CA    UC                  A
Stem-loop sequence UCUUUCAAAAACUGUCUUAGAAAGUAUACUUUUUAAGACGGUUUUUCUAAGAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014771087.1
ncRNA:24   CAAGAAUCUUUUUGGCAGAAUUUU   1
  ||||||*||||||||||||||=||
targets:2526   GUUCUUUGAAAAACCGUCUUAGAA   2549

2.5 PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA uncharacterized LOC102664939(LOC102664939) coding protein psRNATarget
XM_014773077.1
ncRNA:24   CAAGAAUCUUUUUGGCAGAAUUUU   1
  |||-|||*|||||||*||||||||
targets:17   GUU-UUAUAAAAACCAUCUUAAAA   39

2.5 PREDICTED: Glycine max uncharacterized protein C26H5.07c-like (LOC102666872), mRNA uncharacterized protein C26H5.07c-like(LOC102666872) coding protein psRNATarget