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BaseInfo

ncRNA ID	novel_gma_miR6841
Species	Glycine max
Class	miRNA
Genome position	Chr3:27899984-27900061 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451604
Length	20
Mature sequence(if miRNA)	1 - UUUUUUUAUAUAGUAAUAUC - 20
Stem-loop(if miRNA)	-----UU         U      AA      --U      CA        UUGUAUGAA GGAAGA  AUAAGU   ACUGAG  A        ||||||||| ||||||  ||||||   ||||||        GAUAUAUUU UUUUUU  UAUUUA   UGAUUU  A CUAUAAU         -      AA      CUC      AC
Stem-loop sequence	UUUUGUAUGAAUGGAAGAAAAUAAGUUACUGAGCAAACAUUUAGUCUCAUUUAUAAUUUUUUUUUAUAUAGUAAUAUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001317464.1	ncRNA:20   CUAUAAUGAUAUAUUUUUUU   1   *|||||*||||=|||||||| targets:952   UAUAUUUCUAUGUAAAAAAA   971 Target Full Sequence	2.5	Glycine max GATA transcription factor 5-like (LOC100786479), mRNA	GATA transcription factor 5-like(LOC100786479)	coding protein	psRNATarget
BT093501.1	ncRNA:20   CUAUAAUGAUAUAUUUUUUU   1   *|||||*||||=|||||||| targets:952   UAUAUUUCUAUGUAAAAAAA   971 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-14K19 unknown mRNA	NA	coding protein	psRNATarget
NM_001252937.2	ncRNA:20   CUAUAAUGAUAUAUUUUUUU   1   *=||||||||||*||||||| targets:1300   UGUAUUACUAUAAAAAAAAA   1319 Target Full Sequence	2.5	Glycine max B2 protein-like (LOC100775724), mRNA	B2 protein-like(LOC100775724)	coding protein	psRNATarget
BT098800.1	ncRNA:20   CUAUAAUGAUAUAUUUUUUU   1   *=||||||||||*||||||| targets:1302   UGUAUUACUAUAAAAAAAAA   1321 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-13C13 unknown mRNA	NA	coding protein	psRNATarget
AF098663.1	ncRNA:20   CUAUAAUGAUAUAUUUUUUU   1   *||||||||||||||*|||* targets:418   UAUAUUACUAUAUAAUAAAU   437 Target Full Sequence	2.5	Glycine max clone AA03 unknown mRNA, partial cds	NA	coding protein	psRNATarget
NM_001348965.1	ncRNA:20   CUAUAAUGAUAUAUUUUUUU   1   **|||||*|||||||||||| targets:1446   AUUAUUAGUAUAUAAAAAAA   1465 Target Full Sequence	2.5	Glycine max CDK-activating kinase (LOC548056), mRNA	NA	coding protein	psRNATarget
BT095562.1	ncRNA:20   CUAUAAUGAUAUAUUUUUUU   1   **|||||*|||||||||||| targets:1448   AUUAUUAGUAUAUAAAAAAA   1467 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-19F9 unknown mRNA	NA	coding protein	psRNATarget
AY956421.1	ncRNA:20   CUAUAAUGAUAUAUUUUUUU   1   **|||||||||*|||||||| targets:1598   ACUAUUACUAUUUAAAAAAA   1617 Target Full Sequence	2.5	Glycine max homogentisate phytylprenyltransferase (Hpt1) mRNA, complete cds	NA	coding protein	psRNATarget