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BaseInfo

ncRNA ID novel_gma_miR6840
Species Glycine max
Class miRNA
Genome position Chr2:13527883-13527936 [-]
Reference genome Glycine_max_v2.0
Source SRR1451604
Length 24
Mature sequence(if miRNA) 31 - GAUCAACCAAUGAACUUUAUGCCU - 54
Stem-loop(if miRNA) --   C         A U    G    G
  GAU AACCAAUGA C UUAU CCUA G
  ||| ||||||||| | |||| ||||
  CUA UUGGUUAUU G AAUG GGAU G
UA   -         A C    -    A
Stem-loop sequence GAUCAACCAAUGAACUUUAUGCCUAGGGAUAGGGUAACGAUUAUUGGUUAUCAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT098872.1
ncRNA:24   UCCGUAUUUCAAGUAACCAACUAG   1
  |**=*||||||||||||||*||||
targets:668   ACCUUUAAAGUUCAUUGGUGGAUC   691

1.5 Soybean clone JCVI-FLGm-13M11 unknown mRNA NA coding protein psRNATarget
XM_003544764.3
ncRNA:24   UCCGUAUUUCAAGUAACCAACUAG   1
  |**=*||||||||||||||*||||
targets:753   ACCUUUAAAGUUCAUUGGUGGAUC   776

1.5 PREDICTED: Glycine max uncharacterized LOC100796251 (LOC100796251), mRNA uncharacterized LOC100796251(LOC100796251) coding protein psRNATarget