ncRNA ID | novel_gma_miR6823 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:37117154-37117287 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451604;SRR1451611 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAACCGAUGUCAACUGUAUACAUU - 24 |
Stem-loop(if miRNA) |
--UA         A            -UA      C           C             A          UAUACAGUU ACAUCGGUUUUU   CAGAAC GAUGUUAACGU UAUGUUAACAUCG UUUUUA     ||||||||| ||||||||||||   |||||| ||||||||||| ||||||||||||| |||||U     AUAUGUCAA UGUAGCCAAAAA   GUUUUG CUACAAUUGCA AUGUAAUUGUAGU AAAAGA UUAC         C            UAA      A           U             C      |
Stem-loop sequence | UAUAUACAGUUAACAUCGGUUUUUUACAGAACCGAUGUUAACGUCUAUGUUAACAUCGAUUUUUAUAGAAAACUGAUGUUAAUGUAUACGUUAACAUCAGUUUUGAAUAAAAACCGAUGUCAACUGUAUACAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003553253.3 |
|
2.5 | PREDICTED: Glycine max nuclear cap-binding protein subunit 1-like (LOC100791079), mRNA | nuclear cap-binding protein subunit 1-like(LOC100791079) | coding protein | psRNATarget |