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BaseInfo

ncRNA ID novel_gma_miR6823
Species Glycine max
Class miRNA
Genome position Chr1:37117154-37117287 [-]
Reference genome Glycine_max_v2.0
Source SRR1451604;SRR1451611
Length 24
Mature sequence(if miRNA) 1 - AAACCGAUGUCAACUGUAUACAUU - 24
Stem-loop(if miRNA) --UA         A            -UA      C           C             A     
    UAUACAGUU ACAUCGGUUUUU   CAGAAC GAUGUUAACGU UAUGUUAACAUCG UUUUUA
    ||||||||| ||||||||||||   |||||| ||||||||||| ||||||||||||| |||||U
    AUAUGUCAA UGUAGCCAAAAA   GUUUUG CUACAAUUGCA AUGUAAUUGUAGU AAAAGA
UUAC         C            UAA      A           U             C     
Stem-loop sequence UAUAUACAGUUAACAUCGGUUUUUUACAGAACCGAUGUUAACGUCUAUGUUAACAUCGAUUUUUAUAGAAAACUGAUGUUAAUGUAUACGUUAACAUCAGUUUUGAAUAAAAACCGAUGUCAACUGUAUACAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003553253.3
ncRNA:24   UUACAUAUGUCAACUGUAGCCAAA   1
  ||*|*|||||*||||||||||*||
targets:731   AAAGCAUACAUUUGACAUCGGAUU   754

2.5 PREDICTED: Glycine max nuclear cap-binding protein subunit 1-like (LOC100791079), mRNA nuclear cap-binding protein subunit 1-like(LOC100791079) coding protein psRNATarget