Search result

BaseInfo

ncRNA ID	novel_gma_miR6812
Species	Glycine max
Class	miRNA
Genome position	Chr16:7843621-7843755 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451604
Length	21
Mature sequence(if miRNA)	1 - UUCUAAGACGGUUUUGACGAC - 21
Stem-loop(if miRNA)	--UUC             --A  ACUCUGAUUUAAGAAUUGUCUUAAAAUGUCUACUUUCUAAGACGA      UAAGACGGUUUUG   CG                                             U      |||||||||||||   ||                                             U      AUUCUGCUAAGAU   AU                                             U GAAAA             AAC  UCUUGACAGAAUUUUUUGUAUGUAAGAUUCUGCUAAAAAUAUAGU
Stem-loop sequence	UUCUAAGACGGUUUUGACGACUCUGAUUUAAGAAUUGUCUUAAAAUGUCUACUUUCUAAGACGAUUUUGAUAUAAAAAUCGUCUUAGAAUGUAUGUUUUUUAAGACAGUUCUUACAAUAGAAUCGUCUUAAAAAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014764114.1	ncRNA:21   CAGCAGUUUUGGCAGAAUCUU   1   |||*|=|*||||||||||||| targets:1997   GUCUUUAUAACCGUCUUAGAA   2017 Target Full Sequence	3.0	PREDICTED: Glycine max somatic embryogenesis receptor kinase 1-like (LOC100777573), transcript variant X6, mRNA	somatic embryogenesis receptor kinase 1-like(LOC100777573)	coding protein	psRNATarget
XM_014764113.1	ncRNA:21   CAGCAGUUUUGGCAGAAUCUU   1   |||*|=|*||||||||||||| targets:2005   GUCUUUAUAACCGUCUUAGAA   2025 Target Full Sequence	3.0	PREDICTED: Glycine max somatic embryogenesis receptor kinase 1-like (LOC100777573), transcript variant X2, mRNA	somatic embryogenesis receptor kinase 1-like(LOC100777573)	coding protein	psRNATarget
XM_006591004.2	ncRNA:21   CAGCAGUUUUGGCAGAAUCUU   1   |||*|=|*||||||||||||| targets:2061   GUCUUUAUAACCGUCUUAGAA   2081 Target Full Sequence	3.0	PREDICTED: Glycine max somatic embryogenesis receptor kinase 1-like (LOC100777573), transcript variant X5, mRNA	somatic embryogenesis receptor kinase 1-like(LOC100777573)	coding protein	psRNATarget
XM_014764112.1	ncRNA:21   CAGCAGUUUUGGCAGAAUCUU   1   |||*|=|*||||||||||||| targets:2077   GUCUUUAUAACCGUCUUAGAA   2097 Target Full Sequence	3.0	PREDICTED: Glycine max somatic embryogenesis receptor kinase 1-like (LOC100777573), transcript variant X1, mRNA	somatic embryogenesis receptor kinase 1-like(LOC100777573)	coding protein	psRNATarget