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BaseInfo

ncRNA ID novel_gma_miR6806
Species Glycine max
Class miRNA
Genome position Chr15:39949074-39949152 [+]
Reference genome Glycine_max_v2.0
Source SRR1451604
Length 24
Mature sequence(if miRNA) 1 - UUGGAUAGAGAAUUUUAAUUGAGG - 24
Stem-loop(if miRNA) -- UG     A        -    A     --AU     AU
  U  GAUAG GAAUUUUA AUUG GGAAA    AAUUU  C
  |  ||||| |||||||| |||| |||||    |||||
  A  UUGUU CUUAAGAU UAAU UCUUU    UUAAG  A
UA GU     A        C    A     AAAU     AA
Stem-loop sequence UUGGAUAGAGAAUUUUAAUUGAGGAAAAUAAUUUAUCAAAGAAUUUAAAUUUCUAUAAUCUAGAAUUCAUUGUUUGAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006581445.2
ncRNA:24   GGAGUUAAUUUUAAGAGAUAGGUU   1
  ****|=|||||||||||||||*||
targets:1193   GGAGAGUUAAAAUUCUCUAUCAAA   1216

2.5 PREDICTED: Glycine max protein NETWORKED 2A-like (LOC100799426), partial mRNA protein NETWORKED 2A-like(LOC100799426) coding protein psRNATarget