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BaseInfo

ncRNA ID	novel_gma_miR6801
Species	Glycine max
Class	miRNA
Genome position	Chr1:41969721-41969878 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451604
Length	24
Mature sequence(if miRNA)	135 - AAUAAGAACGUGACACAUGACAGU - 158
Stem-loop(if miRNA)	--     C                         CUAC   ACA              -ACCAA  ACAACAAGAAUGCA   UGUCA GUGUCAUGUUCUUAUUGGAUGAUGA    CAC   UCAUGUUUUGAUUG      UG              U   ||||| |||||||||||||||||||||||||    |||   ||||||||||||||      ||              U   ACAGU CACAGUGCAAGAAUAACCUACUACU    GUG   AGUAUAAAACUAAC      CU              U UG     A                         AACA   CAC              CUACAG  UAGGUACCUUAUAC
Stem-loop sequence	UGUCACGUGUCAUGUUCUUAUUGGAUGAUGACUACCACACAUCAUGUUUUGAUUGACCAAUGACAACAAGAAUGCAUUUCAUAUUCCAUGGAUUCGACAUCCAAUCAAAAUAUGACACGUGACAAUCAUCAUCCAAUAAGAACGUGACACAUGACAGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006602607.2	ncRNA:24   UGACAGUACACAGUGCAAGAAUAA   1   |||||||*||||||||||=||||| targets:534   ACUGUCACGUGUCACGUUUUUAUU   557 Target Full Sequence	2.5	PREDICTED: Glycine max transcription factor TGA7-like (LOC100794752), mRNA	transcription factor TGA7-like(LOC100794752)	coding protein	psRNATarget
XM_003518407.3	ncRNA:24   UGACAGUACACAGUGCAAGAAUAA   1   |||||||*||||||||||||*||| targets:1635   ACUGUCACGUGUCACGUUCUGAUU   1658 Target Full Sequence	2.5	PREDICTED: Glycine max UPF0481 protein At3g47200-like (LOC100803577), mRNA	UPF0481 protein At3g47200-like(LOC100803577)	coding protein	psRNATarget
JB170906.1	ncRNA:24   UGACAGUACACAGUGCAAGAAUAA   1   |*|||=|||||||||*|||||||| targets:45   AGUGUUAUGUGUCACAUUCUUAUU   68 Target Full Sequence	2.5	Sequence 8570 from Patent EP2559767	NA	coding protein	psRNATarget
HI410445.1	ncRNA:24   UGACAGUACACAGUGCAAGAAUAA   1   |*|||=|||||||||*|||||||| targets:45   AGUGUUAUGUGUCACAUUCUUAUU   68 Target Full Sequence	2.5	Sequence 8570 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242575.1	ncRNA:24   UGACAGUACACAGUGCAAGAAUAA   1   |*|||=|||||||||*|||||||| targets:45   AGUGUUAUGUGUCACAUUCUUAUU   68 Target Full Sequence	2.5	Sequence 8570 from Patent EP2985353	NA	coding protein	psRNATarget
XM_003529834.3	ncRNA:24   UGACAGUACACAGUGCAAGAAUAA   1   ||*||||*||||||||||=||||| targets:2007   ACGGUCACGUGUCACGUUUUUAUU   2030 Target Full Sequence	2.5	PREDICTED: Glycine max laccase-6-like (LOC100789406), transcript variant X2, mRNA	laccase-6-like(LOC100789406)	coding protein	psRNATarget
XM_014777738.1	ncRNA:24   UGACAGUACACAGUGCAAGAAUAA   1   ||*||||*||||||||||=||||| targets:2152   ACGGUCACGUGUCACGUUUUUAUU   2175 Target Full Sequence	2.5	PREDICTED: Glycine max laccase-6-like (LOC100789406), transcript variant X1, mRNA	laccase-6-like(LOC100789406)	coding protein	psRNATarget