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BaseInfo

ncRNA ID novel_gma_miR6800
Species Glycine max
Class miRNA
Genome position Chr14:44807730-44807790 [+]
Reference genome Glycine_max_v2.0
Source SRR1451604
Length 21
Mature sequence(if miRNA) 41 - UGAAACAAGUCUAAAUGGAUU - 61
Stem-loop(if miRNA) --           A       -CAAC    U
  UCCAUUUAGAU UGUUUCG     ACCA A
  ||||||||||| |||||||     ||||
  AGGUAAAUCUG ACAAAGU     UGGU U
UU           A       UAACU    U
Stem-loop sequence UCCAUUUAGAUAUGUUUCGCAACACCAUAUUUGGUUCAAUUGAAACAAGUCUAAAUGGAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003533691.3
ncRNA:21   UUAGGUAAAUCUGAACAAAGU   1
  |*||||||||||||*|||||*
targets:1458   ACUCCAUUUAGACUAGUUUCU   1478

2.5 PREDICTED: Glycine max RNA-binding KH domain-containing protein PEPPER (LOC100817448), mRNA RNA-binding KH domain-containing protein PEPPER(LOC100817448) coding protein psRNATarget