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BaseInfo

ncRNA ID	novel_gma_miR6798
Species	Glycine max
Class	miRNA
Genome position	Chr14:32247469-32247669 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451604;SRR1451611
Length	24
Mature sequence(if miRNA)	178 - AAAGUUUUUGUAACAAUAGGGACC - 201
Stem-loop(if miRNA)	--     UUA                     U A  C     AUACCACUUU  A           C         GU     -AAU  C         - UA   UCCCU   GUUACAAAAACUUUUCCUUUU G CC UAUGC          UA UUCUUUUUAGU CCUAUACAU  CAUUU    UC UUUUAGUCC C  U   |||||   ||||||||||||||||||||| | || |||||          || ||||||||||| |||||||||  |||||    || ||||||||| |   AGGGA   CAAUGUUUUUGAAAAGGAAAA C GG AUAUG          GU GGGGAAAAUCA GGAUAUGUA  GUAAA    AG GAAAUCAGG G  G CC     UAA                     U A  A     ---AAUUUUU  A           A         UG     AAUU  A         A UG
Stem-loop sequence	UCCCUUUAGUUACAAAAACUUUUCCUUUUUGACCCUAUGCAUACCACUUUUAAUUCUUUUUAGUCCCUAUACAUGUCAUUUAAUUCCUUUUAGUCCCUAUGGUGAGGACUAAAGAGAUUAAAAAUGGUAUGUAUAGGAACUAAAAGGGGAUGUUUUUAAGUAUAAGGACUAAAAGGAAAAGUUUUUGUAACAAUAGGGACC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006599087.2	ncRNA:24   CCAGGGAUAACAAUGUUUUUGAAA   1   |||==||||*|||||||*|||||| targets:3114   GGUUUCUAUAGUUACAACAACUUU   3137 Target Full Sequence	2.5	PREDICTED: Glycine max TMV resistance protein N-like (LOC100806743), transcript variant X2, mRNA	TMV resistance protein N-like(LOC100806743)	coding protein	psRNATarget
XM_003548581.3	ncRNA:24   CCAGGGAUAACAAUGUUUUUGAAA   1   |||==||||*|||||||*|||||| targets:3509   GGUUUCUAUAGUUACAACAACUUU   3532 Target Full Sequence	2.5	PREDICTED: Glycine max TMV resistance protein N-like (LOC100806743), transcript variant X1, mRNA	TMV resistance protein N-like(LOC100806743)	coding protein	psRNATarget
XM_006599440.2	ncRNA:24   CCAGGGAUAACAAUGUUUUUGAAA   1   ****|*||||||||||=||||||| targets:3630   UACACAUAUUGUUACAGAAACUUU   3653 Target Full Sequence	2.5	PREDICTED: Glycine max LRR receptor-like serine/threonine-protein kinase ERL1 (LOC102661933), mRNA	LRR receptor-like serine/threonine-protein kinase ERL1(LOC102661933)	coding protein	psRNATarget