Search result

BaseInfo

ncRNA ID	novel_gma_miR6790
Species	Glycine max
Class	miRNA
Genome position	Chr12:704048-704095 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451604
Length	22
Mature sequence(if miRNA)	27 - AUGAUUGUAGACUUGUAGUAUA - 48
Stem-loop(if miRNA)	--    U    CC       --      UACU CAGG  UUACAAU  UGCC   |||| ||||  |||||||  |||A   AUGA GUUC  GAUGUUA  ACGU AU    U    -A       GU
Stem-loop sequence	UACUUCAGGCCUUACAAUUGCCAUGCAUGAUUGUAGACUUGUAGUAUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK245599.1	ncRNA:22   AUAUGAUGUUCAGAUGUUAGUA   1   *|*||||||||||*|||||||* targets:1894   CAAACUACAAGUCAACAAUCAA   1915 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-35-B18	NA	coding protein	psRNATarget
XM_006580293.2	ncRNA:22   AUAUGAUGUUCAGAUGUUAGUA   1   *|*||||||||||*|||||||* targets:2083   CAAACUACAAGUCAACAAUCAA   2104 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100800289 (LOC100800289), transcript variant X2, mRNA	uncharacterized LOC100800289(LOC100800289)	coding protein	psRNATarget
XM_003525098.3	ncRNA:22   AUAUGAUGUUCAGAUGUUAGUA   1   *|*||||||||||*|||||||* targets:2097   CAAACUACAAGUCAACAAUCAA   2118 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100800289 (LOC100800289), transcript variant X1, mRNA	uncharacterized LOC100800289(LOC100800289)	coding protein	psRNATarget