ncRNA ID | novel_gma_miR6780 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr11:16664096-16664177 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451604 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUCGAGAACCGUCUUAGAAUGCCU - 24 |
Stem-loop(if miRNA) |
-   --               U          C      UGU  GGU  UCUAAGAUGGUUUUU GAAAAAUCGU UUAGAA   A  |||  ||||||||||||||| |||||||||| ||||||  CCG  AGAUUCUGCCAAGAG CUUUUUGGCA AAUCUU   A U   UA               -          A      CUA |
Stem-loop sequence | GGUUCUAAGAUGGUUUUUUGAAAAAUCGUCUUAGAAUGUAAAUCUUCUAAAACGGUUUUUCGAGAACCGUCUUAGAAUGCCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014771087.1 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA | uncharacterized LOC102664939(LOC102664939) | coding protein | psRNATarget |