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BaseInfo

ncRNA ID novel_gma_miR6780
Species Glycine max
Class miRNA
Genome position Chr11:16664096-16664177 [-]
Reference genome Glycine_max_v2.0
Source SRR1451604
Length 24
Mature sequence(if miRNA) 1 - UUCGAGAACCGUCUUAGAAUGCCU - 24
Stem-loop(if miRNA) -   --               U          C      UGU
 GGU  UCUAAGAUGGUUUUU GAAAAAUCGU UUAGAA   A
 |||  ||||||||||||||| |||||||||| ||||||
 CCG  AGAUUCUGCCAAGAG CUUUUUGGCA AAUCUU   A
U   UA               -          A      CUA
Stem-loop sequence GGUUCUAAGAUGGUUUUUUGAAAAAUCGUCUUAGAAUGUAAAUCUUCUAAAACGGUUUUUCGAGAACCGUCUUAGAAUGCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014771087.1
ncRNA:24   UCCGUAAGAUUCUGCCAAGAG-CUU   1
  |**||||||||||||||||||-|||
targets:2607   AUACAUUCUAAGACGGUUCUCUGAA   2631

3.0 PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA uncharacterized LOC102664939(LOC102664939) coding protein psRNATarget